Parental gene: | Ppp4r2, ENSMUSG00000052144 |
| Aliases: | Ppp4r2, BE691708, C230060M08Rik |
| Description: | protein phosphatase 4, regulatory subunit 2 [Source:MGI Symbol;Acc:MGI:3027896] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 6:100833637..100868717(+) |
>ENSMUSG00000052144
ATGGACGTCGAGAGGCTGCAGGAGGCGCTGAAAGATTTTGAGAAGAGAGGGAAAAAGGAAGTTTGTCCTGTACTGGATCA
GTTTCTCTGTCATGTAGCTAAAACTGGAGAAACAATGATTCAGTGGTCCCAATTTAAAGGCTATTTCATTTTCAAACTGG
AGAAAGTGATGGATGATTTCAGAACTTCAGCTCCTGAACCAAGAGGTCCTCCCAATCCTAATGTTGAATATATTCCCTTT
GATGAAATGAAGGAAAGAATACTGAAAATTGTCACTGGATTTAATGGTATCCCTTTTACTATTCAGCGGCTATGTGAATT
GCTAACGGATCCGAGAAGAAACTATACAGGAACAGACAAGTTTCTCAGAGGAGTAGAGAAGAATGTGATGGTTGTTAGCT
GCGTTTGTCCATCCTCAGAGAAGAACAATTCTAATAGCTTAAATAGAATGAATGGTGTTATGTTTCCTGGAAACTCACCA
AACTATACTGACAGGTCTAATATAAACGGGCCTGGAACACCTAGGCCACTTAATCGACCAAAGCTTTCTTTGTCAGCCCC
CTTGACAACAAATGGTTTGCCTGAGAGCACAGATAGCAAAGATTCTGAGCTGCAGCTAAGTGAAGAGAAAGGCCACAGTG
ATTCTTCAGCCTCTGAATCAGAAGTTTCCTTACTGAGCCCTGTTAAAAATAAACATCCAGATGAAGATGCTGTGGAGTCT
GAGGAACATGAGGTGAAAAGACTGAAGTTTGACAAAGAAGGTGACGTCAGAGAGACAGCTAGCCAAACGGTGTCTGGTGA
AGTCTCTTCAGTTAGAGCAGAGGAAACGGAAACAGCAGCTCCCCCTCCTGACAAGGACAGAGAAAGTCGAACCAGGCAGC
ACTGTACAGAAGAGGAGGAGGAGGAGGAGGAAGAAGAGGAAGAGGAGGAGGAAGAATCGTTTATGACACCAAGAGAAATG
GTCCCAGAAAGAAAAAATCAAGAAAAGGAATCTGATGACGCCTTAACTGTGAATGAAGAGACTTCAGAGGAGAGCCATCA
GATGGAAGGCTCTGGTGTGTCTCCAGCTCAGACAGACTCCACTTCAGAAAGGAGTGACAGTGCAGGGGCCTCAAGGAGTG
GCTCTGACTGCCTGGAGACACAGGAGTCAGGAGGGCCCCCTTCCAGTAAGACTGGAGAGAGTGTGTCAGTGCCGTCGTCC
ATGGAGAGTGAGGAAGCCGCAGAAGTCACAGATGACCCAATGGAGCAAGACTAA
ATGGACGTCGAGAGGCTGCAGGAGGCGCTGAAAGATTTTGAGAAGAGAGGGAAAAAGGAAGTTTGTCCTGTACTGGATCA
GTTTCTCTGTCATGTAGCTAAAACTGGAGAAACAATGATTCAGTGGTCCCAATTTAAAGGCTATTTCATTTTCAAACTGG
AGAAAGTGATGGATGATTTCAGAACTTCAGCTCCTGAACCAAGAGGTCCTCCCAATCCTAATGTTGAATATATTCCCTTT
GATGAAATGAAGGAAAGAATACTGAAAATTGTCACTGGATTTAATGGTATCCCTTTTACTATTCAGCGGCTATGTGAATT
GCTAACGGATCCGAGAAGAAACTATACAGGAACAGACAAGTTTCTCAGAGGAGTAGAGAAGAATGTGATGGTTGTTAGCT
GCGTTTGTCCATCCTCAGAGAAGAACAATTCTAATAGCTTAAATAGAATGAATGGTGTTATGTTTCCTGGAAACTCACCA
AACTATACTGACAGGTCTAATATAAACGGGCCTGGAACACCTAGGCCACTTAATCGACCAAAGCTTTCTTTGTCAGCCCC
CTTGACAACAAATGGTTTGCCTGAGAGCACAGATAGCAAAGATTCTGAGCTGCAGCTAAGTGAAGAGAAAGGCCACAGTG
ATTCTTCAGCCTCTGAATCAGAAGTTTCCTTACTGAGCCCTGTTAAAAATAAACATCCAGATGAAGATGCTGTGGAGTCT
GAGGAACATGAGGTGAAAAGACTGAAGTTTGACAAAGAAGGTGACGTCAGAGAGACAGCTAGCCAAACGGTGTCTGGTGA
AGTCTCTTCAGTTAGAGCAGAGGAAACGGAAACAGCAGCTCCCCCTCCTGACAAGGACAGAGAAAGTCGAACCAGGCAGC
ACTGTACAGAAGAGGAGGAGGAGGAGGAGGAAGAAGAGGAAGAGGAGGAGGAAGAATCGTTTATGACACCAAGAGAAATG
GTCCCAGAAAGAAAAAATCAAGAAAAGGAATCTGATGACGCCTTAACTGTGAATGAAGAGACTTCAGAGGAGAGCCATCA
GATGGAAGGCTCTGGTGTGTCTCCAGCTCAGACAGACTCCACTTCAGAAAGGAGTGACAGTGCAGGGGCCTCAAGGAGTG
GCTCTGACTGCCTGGAGACACAGGAGTCAGGAGGGCCCCCTTCCAGTAAGACTGGAGAGAGTGTGTCAGTGCCGTCGTCC
ATGGAGAGTGAGGAAGCCGCAGAAGTCACAGATGACCCAATGGAGCAAGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 27 .73 RPM |
| SRP007412_cerebellum | 20 .80 RPM |
| SRP007412_heart | 14 .16 RPM |
| SRP007412_kidney | 21 .77 RPM |
| SRP007412_liver | 15 .76 RPM |
| SRP007412_testis | 30 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007954 | ortholog_one2one | 3 retrogenes | |
| Echinops telfairi | ENSETEG00000019946 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000163605 | ortholog_one2one | 6 retrogenes | |
| Loxodonta africana | ENSLAFG00000000513 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000016959 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000006235 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000015108 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1068 | 99.32 | 70.74 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1157 | 99.32 | 70.74 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_3474 | 92.98 | 71.70 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000052144 retrocopies