Parental gene: | Nsmce2, ENSMUSG00000059586 |
| Aliases: | Nsmce2, 1110014D18Rik, AI661537 |
| Description: | non-SMC element 2 homolog (MMS21, S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1915751] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 15:59374197..59601683(+) |
>ENSMUSG00000059586
ATGCCAGGACGGTCCAGTACAAGTTCAGGTTCTACCCGTTACATATCCTTCAGTGGCATAGAGTCAGCTCTCTCCTCCTT
AAAAAACTTCCAATCCTGTATCAGCTCTGGAATGGACACAGTTTCTAGTGTTGCCTTGGACCTTGTGGAGACTCAAACTG
AAGTGAGTAGTGAGTACAGTATGGACAAGGCCATGGTTGAGTTTGCTAAAATGGATCGAGAACTAAGCCATTATGTTAAG
GCTGTGCAGTCTACAATCAATCATGTAAAAGAAGAACGTCCAGAAAAAGTACCAGATTTAAAATTACTGGTAGAGAAGAA
ATTTTTGGCTTTACAGGATAAGAACTCTGATGCCGACTTTAAAGAGAATGAAAAGTTCGTGCAGTTCAAGCAACAGCTGA
GGGAGCTGAAGAAGCAATATGGTATTCATGCAGACAGAGAGAATGATCTGACAGAAGGAGTTGACGAAGATATGATTGTG
ACCCAGAGCCAAACCAATTTCATCTGCCCCATAACACAGCTGGAAATGAAGAAGCCAGTGAAAAATAAAATGTGTGGCCA
TACATACGAAGAGGAAGCCATTGTTCGCATGATTGAATCCAAGCATAAGAGGAAGAAGAAGGCCTGTTGCCCCAAAATTG
GCTGTAGCCACACAGACATGAGAATGTCAGATCTCATTCCGGATGAAGCCCTGAGAAGGGCAATCGAGAGCCACAACAAG
AAGAAAAAACGCCACTCCGAATAG
ATGCCAGGACGGTCCAGTACAAGTTCAGGTTCTACCCGTTACATATCCTTCAGTGGCATAGAGTCAGCTCTCTCCTCCTT
AAAAAACTTCCAATCCTGTATCAGCTCTGGAATGGACACAGTTTCTAGTGTTGCCTTGGACCTTGTGGAGACTCAAACTG
AAGTGAGTAGTGAGTACAGTATGGACAAGGCCATGGTTGAGTTTGCTAAAATGGATCGAGAACTAAGCCATTATGTTAAG
GCTGTGCAGTCTACAATCAATCATGTAAAAGAAGAACGTCCAGAAAAAGTACCAGATTTAAAATTACTGGTAGAGAAGAA
ATTTTTGGCTTTACAGGATAAGAACTCTGATGCCGACTTTAAAGAGAATGAAAAGTTCGTGCAGTTCAAGCAACAGCTGA
GGGAGCTGAAGAAGCAATATGGTATTCATGCAGACAGAGAGAATGATCTGACAGAAGGAGTTGACGAAGATATGATTGTG
ACCCAGAGCCAAACCAATTTCATCTGCCCCATAACACAGCTGGAAATGAAGAAGCCAGTGAAAAATAAAATGTGTGGCCA
TACATACGAAGAGGAAGCCATTGTTCGCATGATTGAATCCAAGCATAAGAGGAAGAAGAAGGCCTGTTGCCCCAAAATTG
GCTGTAGCCACACAGACATGAGAATGTCAGATCTCATTCCGGATGAAGCCCTGAGAAGGGCAATCGAGAGCCACAACAAG
AAGAAAAAACGCCACTCCGAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 18 .08 RPM |
| SRP007412_cerebellum | 12 .64 RPM |
| SRP007412_heart | 17 .06 RPM |
| SRP007412_kidney | 13 .80 RPM |
| SRP007412_liver | 7 .65 RPM |
| SRP007412_testis | 14 .13 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009394 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000019897 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003542 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000015798 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000003964 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000005371 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1189 | 86.52 | 56.28 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1190 | 77.69 | 51.42 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_3227 | 51.31 | 76.52 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000059586 retrocopies