Parental gene:

RAP1B, ENSNLEG00000003573

Aliases:None
Description:None
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397276.1:4224462..4278097(+)


>ENSNLEG00000003573
ATGCGTGAGTATAAGCTAGTCGTTCTTGGCTCAGGAGGCGTTGGAAAGTCTGCTTTGACTGTACAATTTGTTCAAGGAAT
TTTTGTAGAAAAATATGATCCTACGATAGAAGATTCTTATAGAAAGCAAGTTGAAGTAGATGCACAACAGTGTATGCTTG
AAATCTTGGATACTGCAGGAACGGAACAATTTACAGCAATGAGGGATTTGTACATGAAAAATGGACAAGGATTTGCATTA
GTTTATTCCATCACAGCACAGTCCACATTTAACGATTTACAAGACCTGAGAGAACAGATTCTTCGAGTTAAAGACACTGA
TGATGTTCCAATGATTCTTGTTGGTAATAAGTGTGACTTGGAAGATGAAAGAGTTGTAGGGAAGGAACAAGGTCAAAATC
TAGCAAGACAATGGAACAACTGTGCATTCTTAGAATCTTCTGCAAAATCAAAAATAAATGTTAATGAGATCTTTTATGAC
CTAGTGCGGCAAATTAACAGAAAAACTCCAGTGCCTGGGAAGGCTCGCAAAAAGTCATCATGTCAGTTGCTTTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008637 possible_ortholog 1 retrogene
retro_amel_103,
Callithrix jacchus ENSCJAG00000007261 ortholog_one2one 3 retrogenes
retro_cjac_1435, retro_cjac_2371, retro_cjac_607,
Cavia porcellus ENSCPOG00000008272 possible_ortholog 4 retrogenes
retro_cpor_1194, retro_cpor_632, retro_cpor_739, retro_cpor_85,
Gorilla gorilla ENSGGOG00000025649 ortholog_one2one 1 retrogene
retro_ggor_2836,
Loxodonta africana ENSLAFG00000016460 possible_ortholog 1 retrogene
retro_lafr_482,
Mus musculus ENSMUSG00000052681 ortholog_one2one 1 retrogene
retro_mmus_1370,
Nomascus leucogenys ENSNLEG00000003055 other_paralog 1 retrogene
retro_nleu_935,
Nomascus leucogenys ENSNLEG00000004018 within_species_paralog 1 retrogene
retro_nleu_1069,
Nomascus leucogenys ENSNLEG00000005266 other_paralog 1 retrogene
retro_nleu_338,
Otolemur garnettii ENSOGAG00000005746 ortholog_one2one 2 retrogenes
retro_ogar_2260, retro_ogar_272,
Sarcophilus harrisii ENSSHAG00000011497 ortholog_one2one 1 retrogene
retro_shar_425,
Sus scrofa ENSSSCG00000030014 possible_ortholog 2 retrogenes
retro_sscr_435, retro_sscr_909,
Tupaia belangeri ENSTBEG00000013380 ortholog_one2one 4 retrogenes
retro_tbel_2145, retro_tbel_4650, retro_tbel_4658, retro_tbel_613,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_481 78.48 84.24
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2. retro_nleu_1034 88.65 100.00
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Download FASTA sequences of all ENSNLEG00000003573 retrocopies