Parental gene: | DPPA4, ENSNLEG00000004030 |
| Aliases: | None |
| Description: | None |
| Organism: | Gibbon (Nomascus leucogenys) |
| Coordinates: | GL397284.1:15824240..15834134(-) |
>ENSNLEG00000004030
ATCTTGCGAGGCTCCGCTTCTTCTACAAGTATGGAGAAGGCAAAAGGCAAGGAGTGGACCTCCACAGAGAAGTCGAGGGA
AGAGGATCAGCAGGCTTCTAATCAACCAAATACAATTGCTTTGCCAGGAACATCAGCAAAGAGAACCAAAGAAAAAATGT
CTGTGAAAGGCAATAAAGTGCTCTGCCCTAAGAAGAAGGCAGAGCACACTGACAACCCCAGACCTCAGAAGAAGATACCA
ATCCCTCCATTACCCTCTAAACTGCCACCTGTTAATCTGATTCACCGGGACATTCTACGGGCCTGGTGCCAACAATTGAA
GCTGAGCTCCAAAGGCCAGAAATTGGATGCATATAAGCGCCTGTGTGCCTTTGCCTACCCAAATCAAAAGGATTTTCCTA
GCACAGCAAAAGAGGCCAAAATCCGGAAATCATTGCAAAAAAAATTAAAGGTGGAAAAAGGGGAAACGTCCCTGCAAAGT
TCTGAGACACATCCTCCTGAAGTGGCTCTTCCCCCTGCAGGGGGCCCGCCTGCCCTGGAACATTCCACTGCTCTCCTTGA
GGGAGTTAATACAGTTGTGGTGACAACTTCTGCCCCAGAGGCTTTGCTGGCCTCCTGGGCGAGAATTTCGGCCAGGGCGA
GGACGCCAGAGGCAGTGGAATCTCCACAAGAGGCCTCTGGTGTCAGATGGTGTGTGGTCCATGGGAAAAGTCTCCCTGCA
GACACAGATGGTTGGGTTCACCTGCAGTTTCATGCTGGTCAAGCCTGGGTTCCAGAAAAGCAAGAAGGGAGAGTGAGTGC
ACTCTTCTTGCTTCCTGCCTCCAATTTTCCACCCCCGCACCTTGAAGACAATATGTTGTGCCCCAAATGTGTTCACAGGA
ACAAGGTCTTAATAAAAAGCCTCCAATGGGAATAG
ATCTTGCGAGGCTCCGCTTCTTCTACAAGTATGGAGAAGGCAAAAGGCAAGGAGTGGACCTCCACAGAGAAGTCGAGGGA
AGAGGATCAGCAGGCTTCTAATCAACCAAATACAATTGCTTTGCCAGGAACATCAGCAAAGAGAACCAAAGAAAAAATGT
CTGTGAAAGGCAATAAAGTGCTCTGCCCTAAGAAGAAGGCAGAGCACACTGACAACCCCAGACCTCAGAAGAAGATACCA
ATCCCTCCATTACCCTCTAAACTGCCACCTGTTAATCTGATTCACCGGGACATTCTACGGGCCTGGTGCCAACAATTGAA
GCTGAGCTCCAAAGGCCAGAAATTGGATGCATATAAGCGCCTGTGTGCCTTTGCCTACCCAAATCAAAAGGATTTTCCTA
GCACAGCAAAAGAGGCCAAAATCCGGAAATCATTGCAAAAAAAATTAAAGGTGGAAAAAGGGGAAACGTCCCTGCAAAGT
TCTGAGACACATCCTCCTGAAGTGGCTCTTCCCCCTGCAGGGGGCCCGCCTGCCCTGGAACATTCCACTGCTCTCCTTGA
GGGAGTTAATACAGTTGTGGTGACAACTTCTGCCCCAGAGGCTTTGCTGGCCTCCTGGGCGAGAATTTCGGCCAGGGCGA
GGACGCCAGAGGCAGTGGAATCTCCACAAGAGGCCTCTGGTGTCAGATGGTGTGTGGTCCATGGGAAAAGTCTCCCTGCA
GACACAGATGGTTGGGTTCACCTGCAGTTTCATGCTGGTCAAGCCTGGGTTCCAGAAAAGCAAGAAGGGAGAGTGAGTGC
ACTCTTCTTGCTTCCTGCCTCCAATTTTCCACCCCCGCACCTTGAAGACAATATGTTGTGCCCCAAATGTGTTCACAGGA
ACAAGGTCTTAATAAAAAGCCTCCAATGGGAATAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000010335 | ortholog_one2many | 5 retrogenes | |
| Callithrix jacchus | ENSCJAG00000020171 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000002722 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000121570 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015121 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000016804 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000016423 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000016901 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000018083 | ortholog_one2many | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000010206 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000058550 | ortholog_one2many | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000004020 | within_species_paralog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000016435 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013565 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000015200 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000010677 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000025404 | ortholog_one2many | 4 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000017398 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009508 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_nleu_388 | 80.95 | 61.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_nleu_2888 | 70.55 | 87.83 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_nleu_3018 | 90.54 | 96.38 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSNLEG00000004030 retrocopies