Parental gene: | ARMC1, ENSOCUG00000000392 |
| Aliases: | None |
| Description: | armadillo repeat containing 1 [Source:HGNC Symbol;Acc:17684] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 3:81517415..81538051(-) |
>ENSOCUG00000000392
ATGAATTCTTCCTCCTCTACCATGAATGAAGAACCTGATGCTCTATCAGTAGTTAACCAGCTACGAGATTTAGCAGCAGA
TCCATTAAATAGACGAGCCATCGTCCAGGACCAGGGATGTCTGCCTGGCCTTATTCTGTTTATGGACCATCCCAACCCCC
CTGTGGTCCACTCAGCTTTGCTCGCTCTGCGATACTTGGCAGAATGCCGTGCGAACAGAGAGAAGATGAAGGGGGAACTG
GGTATGATGTTGAGCTTACAAAATGTTATACAGAAAACTACAACTCCAGGAGAAACAAAACTCCTGGCCTCTGAAATCTA
TGACATTCTTCAGTCCTCTAATATGGCAGATGGCGATAGCTTCAGTGAAATGAATTCACGTCGAAGGAAAGCTCAGTTTT
TTCTGGGAACTACAAACAAACGTGCCAAAACAGTGGTTTTGCATATAGATGGTCTTGATGATACGTCTCGGAGAAATCTA
TGTGAAGAGGCTTTGTTAAAAATTAAAGGTGTTATTAGCTTTACTTTTCAAATGGCTGTGCAAAGATGTGTGGTGCGAAT
CCGTTCAGATTTGAAGGCGGAGGCTTTGGCATCAGCGATAGCATCAACCAAGGTTATGAAAGCTCAGCAAGTTGTGAAAA
GTGAAAGTGGAGAAGAGATGCTGGTCCCGTTCCAAGATACTCCTATGGAAGTAGAGCAGAACACAGAGCTGCCTGACTAC
CTGCCCGAGGATGAGAGTCCCACCAAGGAGCAGGACAAAGCAGTGTCCCGGGTCGGCTCACACCCGGAGGGTGGAGCTAG
CTGGCTGAGCACAGCTGCAAACTTTTTATCCAGGTCATTTTACTGGTGA
ATGAATTCTTCCTCCTCTACCATGAATGAAGAACCTGATGCTCTATCAGTAGTTAACCAGCTACGAGATTTAGCAGCAGA
TCCATTAAATAGACGAGCCATCGTCCAGGACCAGGGATGTCTGCCTGGCCTTATTCTGTTTATGGACCATCCCAACCCCC
CTGTGGTCCACTCAGCTTTGCTCGCTCTGCGATACTTGGCAGAATGCCGTGCGAACAGAGAGAAGATGAAGGGGGAACTG
GGTATGATGTTGAGCTTACAAAATGTTATACAGAAAACTACAACTCCAGGAGAAACAAAACTCCTGGCCTCTGAAATCTA
TGACATTCTTCAGTCCTCTAATATGGCAGATGGCGATAGCTTCAGTGAAATGAATTCACGTCGAAGGAAAGCTCAGTTTT
TTCTGGGAACTACAAACAAACGTGCCAAAACAGTGGTTTTGCATATAGATGGTCTTGATGATACGTCTCGGAGAAATCTA
TGTGAAGAGGCTTTGTTAAAAATTAAAGGTGTTATTAGCTTTACTTTTCAAATGGCTGTGCAAAGATGTGTGGTGCGAAT
CCGTTCAGATTTGAAGGCGGAGGCTTTGGCATCAGCGATAGCATCAACCAAGGTTATGAAAGCTCAGCAAGTTGTGAAAA
GTGAAAGTGGAGAAGAGATGCTGGTCCCGTTCCAAGATACTCCTATGGAAGTAGAGCAGAACACAGAGCTGCCTGACTAC
CTGCCCGAGGATGAGAGTCCCACCAAGGAGCAGGACAAAGCAGTGTCCCGGGTCGGCTCACACCCGGAGGGTGGAGCTAG
CTGGCTGAGCACAGCTGCAAACTTTTTATCCAGGTCATTTTACTGGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 6 .78 RPM |
| SRP017611_kidney | 9 .02 RPM |
| SRP017611_brain | 17 .16 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000015901 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000104442 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000022803 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000014037 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003916 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018630 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000020298 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000006220 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_782 | 86.32 | 67.02 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1437 | 93.29 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000000392 retrocopies