Parental gene:

ARMC1, ENSPTRG00000020298

Aliases:None
Description:Armadillo repeat-containing protein 1 [Source:UniProtKB/TrEMBL;Acc:H2QW84]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:8:63424461..63457055(-)


>ENSPTRG00000020298
ATGAATTCTTCCACTTCCACCATGAGTGAAGAGCCTGACGCTCTATCGGTAGTTAACCAGTTACGGGATCTAGCAGCAGA
TCCGTTAAACAGAAGAGCCATCGTCCAGGATCAGGGATGTCTGCCTGGCCTTATTTTATTTATGGACCATCCCAACCCTC
CAGTCGTCCACTCCGCTTTGCTTGCTCTTCGATACTTGGCAGAATGCCGTGCAAACAGAGAAAAGATGAAAGGAGAACTG
GGTATGATGTTGAGCTTACAAAATGTTATACAGAAAACTACAACTCCAGGAGAAACAAAACTTCTGGCCTCTGAAATCTA
TGACATTCTTCAGTCCTCCAATATGGCAGATGGTGATAGTTTTAATGAGATGAATTCACGTCGAAGGAAAGCTCAGTTTT
TTCTGGGAACTACAAACAAACGTGCCAAAACAGTGGTTTTGCATATAGATGGCCTTGATGATACGTCTCGGAGAAATCTA
TGTGAAGAGGCTTTGTTAAAAATTAAAGGTGTTATTAGCTTTACTTTTCAAATGGCTGTTCAAAGGTGTGTGGTGCGAAT
CCGTTCAGATTTGAAAGCTGAGGCTTTGGCATCAGCAATAGCATCAACCAAGGTTATGAAAGCTCAGCAAGTTGTGAAAA
GTGAAAGTGGAGAAGAGATGTTGGTCCCATTCCAAGATACTCCTGTGGAAGTTGAACAGAACACAGAGCTACCTGACTAC
CTGCCTGAGGATGAGAGTCCCACAAAGGAACAGGACAAAGCGGTGTCCCGGGTCGGCTCACACCCAGAAGGTGGAGCTAG
CTGGCTTAGCACAGCTGCAAACTTTTTATCCAGATCATTTTATTGGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 26 .31 RPM
SRP007412_cerebellum 27 .85 RPM
SRP007412_heart 16 .53 RPM
SRP007412_kidney 19 .33 RPM
SRP007412_liver 11 .39 RPM
SRP007412_testis 14 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000015901 ortholog_one2one 1 retrogene
retro_btau_1447,
Homo sapiens ENSG00000104442 ortholog_one2one 1 retrogene
retro_hsap_3100,
Gorilla gorilla ENSGGOG00000022803 ortholog_one2one 1 retrogene
retro_ggor_2129,
Myotis lucifugus ENSMLUG00000014037 ortholog_one2one 1 retrogene
retro_mluc_2058,
Nomascus leucogenys ENSNLEG00000003916 ortholog_one2one 1 retrogene
retro_nleu_1518,
Oryctolagus cuniculus ENSOCUG00000000392 ortholog_one2one 2 retrogenes
retro_ocun_1437, retro_ocun_782,
Pongo abelii ENSPPYG00000018630 ortholog_one2one 1 retrogene
retro_pabe_2474,
Sus scrofa ENSSSCG00000006220 ortholog_one2one 1 retrogene
retro_sscr_1027,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2096 81.98 100.00
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Download FASTA sequences of all ENSPTRG00000020298 retrocopies