Parental gene:

RPS28, ENSOCUG00000021484

Aliases:None
Description:ribosomal protein S28 [Source:HGNC Symbol;Acc:10418]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018767:383777..384626(-)


>ENSOCUG00000021484
ATGGACACGAGTAGAGTGCAGCCCATCAAACTGGCCAGGGTCACCAAGGTGCTGGGCAGGACCGGCTCTCAGGGACAGTG
CACGCAGGTGCGCGTGGAGTTCATGGACGACACGAGCCGCTCCATCATCCGCAACGTGAAAGGCCCCGTGCGGGAGGGCG
ACGTGCTCACCCTGCTGGAGTCAGAGCGGGAGGCTCGGAGGCTGCGCTGA

Library Parental gene expression (RPM)
SRP017611_liver 18 .81 RPM
SRP017611_kidney 92 .74 RPM
SRP017611_brain 38 .85 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004917 ortholog_one2one 1 retrogene
retro_amel_1359,
Felis catus ENSFCAG00000024931 ortholog_one2one 3 retrogenes
retro_fcat_1130, retro_fcat_611, retro_fcat_752,
Loxodonta africana ENSLAFG00000029923 ortholog_one2one 2 retrogenes
retro_lafr_168, retro_lafr_755,
Macaca mulatta ENSMMUG00000028895 possible_ortholog 3 retrogenes
retro_mmul_122, retro_mmul_182, retro_mmul_807,
Monodelphis domestica ENSMODG00000003890 possible_ortholog 1 retrogene
retro_mdom_291,
Mus musculus ENSMUSG00000067288 ortholog_one2one 3 retrogenes
retro_mmus_2949, retro_mmus_3283, retro_mmus_91,
Rattus norvegicus ENSRNOG00000042886 possible_ortholog 2 retrogenes
retro_rnor_95, retro_rnor_96,
Sus scrofa ENSSSCG00000013597 ortholog_one2one 3 retrogenes
retro_sscr_132, retro_sscr_191, retro_sscr_808,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1230 54.29 100.00
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2. retro_ocun_1799 88.57 100.00
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Download FASTA sequences of all ENSOCUG00000021484 retrocopies