Parental gene: | CCNE1, ENSOGAG00000006217 |
| Aliases: | None |
| Description: | cyclin E1 [Source:HGNC Symbol;Acc:1589] |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873654.1:1343382..1354619(+) |
>ENSOGAG00000006217
ATGCCGAGGGAGAGGAGGGAGAGGGATGCGAAGGAACGGGGCTCTGTGAAGGAGGAAGGTGGCATGGATTTCTCTGTTCG
CTCCAGGAAAAGGAAGGCAAATGTGGCCGTTTTTTTGCAGGATCCAGATGAAGAAATTGCCAAAATTGACAAGACTGTGA
GAGGCCAGTGTGGCAGCAGTCAGTCTTGGGACAGTAACACAGTCTGTGCAAACCCCTGTTCCTTGATCCCCACACCTGAC
AAAGAGGAGGATGAGCTGGTGTACCCGACTCCGACGTACAAGCCTCAGATCACGCCGTCCAGGGCCTCCCCACTGCCTCT
GCTGAACTGGGCAAATCGAGAGGAAGTCTGGAAGATCATGCTGAACAAGGAGAAGACGTACCTGCGGGACCAGCACCTGC
TGCAGCGGCACCCTCTGCTGCAGCCTCACATGCGCGCCATCCTCCTGGACTGGCTGATGGAGGTGTGTGAAGTCTATAAA
CTCCACAGGGAGACCTTCTACTTGGCACAGGATTTCTTTGATCGGTATATGGCAACACAAGAGAACATTGTGAAAACACT
TCTACAGCTTATTGGGATCTCATCTTTATTTATTGCAGCCAAACTTGAGGAAATCTATCCTCCAAAGTTGCACCAGTTTG
CTTATGTCACGGACGGGGCTTGTTCAGGAGATGAAATTCTTACCATGGAGTTAATGATTATGAAGGCTCTTAAGTGGCGC
TTAAGTCCCCTGACCATTGTGTCCTGGCTGAATGTGTACCTGCAGGTCGCATATCTGAACGACTTACATGAAGTGCTCTT
GCCACAGTATCCTCAGCAGATCTTTATTCAGATTGCAGAGCTCTTAGACCTCTGCGTCCTGGATGTGGACTGCTTAGAAT
TCTCCTACGGGGTGCTCGCTGCTTCTGCCTTGTATCATTTCTCTTCGTCTGAACTGATGCAAAAGGTTTCAGGGTATCAG
TGGTGTGACATAGAGCACTGTGTCAAGTGGATGGTCCCATTTGCCATGGTCATCAGGGAGACAGGCAGCTCGAAGCTGAA
GCACTTCAGGGGGGTTCCTGCGGACGACGCACACAACATCCAGACCCATAGGGACAGCTTGGACTTGCTGGACAAAGCCC
AAGCAAAGAAAGCCATACTGTCTGAACAGAATAGGATTTCTCCTGTGCCCACTGGCGTCCTCACCCCACCACACAGCAGT
AAGAAGCAGAGTGATGAGCAGGGGACAGCATGA
ATGCCGAGGGAGAGGAGGGAGAGGGATGCGAAGGAACGGGGCTCTGTGAAGGAGGAAGGTGGCATGGATTTCTCTGTTCG
CTCCAGGAAAAGGAAGGCAAATGTGGCCGTTTTTTTGCAGGATCCAGATGAAGAAATTGCCAAAATTGACAAGACTGTGA
GAGGCCAGTGTGGCAGCAGTCAGTCTTGGGACAGTAACACAGTCTGTGCAAACCCCTGTTCCTTGATCCCCACACCTGAC
AAAGAGGAGGATGAGCTGGTGTACCCGACTCCGACGTACAAGCCTCAGATCACGCCGTCCAGGGCCTCCCCACTGCCTCT
GCTGAACTGGGCAAATCGAGAGGAAGTCTGGAAGATCATGCTGAACAAGGAGAAGACGTACCTGCGGGACCAGCACCTGC
TGCAGCGGCACCCTCTGCTGCAGCCTCACATGCGCGCCATCCTCCTGGACTGGCTGATGGAGGTGTGTGAAGTCTATAAA
CTCCACAGGGAGACCTTCTACTTGGCACAGGATTTCTTTGATCGGTATATGGCAACACAAGAGAACATTGTGAAAACACT
TCTACAGCTTATTGGGATCTCATCTTTATTTATTGCAGCCAAACTTGAGGAAATCTATCCTCCAAAGTTGCACCAGTTTG
CTTATGTCACGGACGGGGCTTGTTCAGGAGATGAAATTCTTACCATGGAGTTAATGATTATGAAGGCTCTTAAGTGGCGC
TTAAGTCCCCTGACCATTGTGTCCTGGCTGAATGTGTACCTGCAGGTCGCATATCTGAACGACTTACATGAAGTGCTCTT
GCCACAGTATCCTCAGCAGATCTTTATTCAGATTGCAGAGCTCTTAGACCTCTGCGTCCTGGATGTGGACTGCTTAGAAT
TCTCCTACGGGGTGCTCGCTGCTTCTGCCTTGTATCATTTCTCTTCGTCTGAACTGATGCAAAAGGTTTCAGGGTATCAG
TGGTGTGACATAGAGCACTGTGTCAAGTGGATGGTCCCATTTGCCATGGTCATCAGGGAGACAGGCAGCTCGAAGCTGAA
GCACTTCAGGGGGGTTCCTGCGGACGACGCACACAACATCCAGACCCATAGGGACAGCTTGGACTTGCTGGACAAAGCCC
AAGCAAAGAAAGCCATACTGTCTGAACAGAATAGGATTTCTCCTGTGCCCACTGGCGTCCTCACCCCACCACACAGCAGT
AAGAAGCAGAGTGATGAGCAGGGGACAGCATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001857 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000009143 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005208 | within_species_paralog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000012885 | other_paralog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000034667 | within_species_paralog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000002855 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000001390 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_930 | 88.35 | 99.76 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ogar_3309 | 87.90 | 90.24 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOGAG00000006217 retrocopies