Parental gene: | LETM1, ENSOGAG00000014883 |
| Aliases: | None |
| Description: | leucine zipper-EF-hand containing transmembrane protein 1 [Source:HGNC Symbol;Acc:6556] |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873717.1:978567..1021905(-) |
>ENSOGAG00000014883
ATGGCGTCCATCTTACTTAGGAGCTGCCGCGGCCGGGGGCCTGCCCGCCTCCCGCCACCTCGCGCCGCGGCCTCGCGGGG
TGGTCTGGAGGATCCTGCTTGTCTCAGTTGTGCCAACACAGGGCTGCGAAGCCTGGTGGGGTTGAGAAGCCTTGTGAATG
TTCCGATGGGCTGCTATACTCCGGGCCACCTTGCGTACCTTTCTCTTAGAGGTGTTCATCGTGGCTGTTGGACTCTGAGG
CTTGAGTGTCCACGCACAGTGGCAAGAGCACCATGGACTCCTGCCATGGGGGGGTTGGTTGTCGCAGGGCCCCAGTGCCT
TCCGTTGCGTGGCTGGCACTCATCGACTCCCCTCAGTGACGATTCTATGGTGGAGAAGTCCCTCAGATCATTGAAGGACA
AGAACAAGAAACTGGAGGAGGGGGGGCCAGTGTATAGCCCCCCTGCGGAGGTGGTGGTGAAGAAATCCCTCGGGCAGAGG
GTACTAGATGAACTGAAGCACTACTACCACGGCTTCCGCCTGCTCTGGATCGACACCAAGATCGCTGCGCGCATGCTCTG
GCGTATCCTCAATGGCCACAGCCTGACCCGCCGGGAGCGCAGGCAGTTTCTCCGGATCTGTGCCGACCTCTTCCGCCTGG
TGCCCTTCCTTGTGTTTGTGGTGGTGCCCTTCATGGAGTTCCTGCTACCAGTGGCCGTGAAACTATTCCCCAACATGTTG
CCATCCACATTTGAGACCCAGTCCATCAAGGAGGAGAGGCTAAAGAAGGAGCTTCGGGTCAAGCTAGAGCTGGCCAAGTT
CCTCCAGGACACCATTGAAGAGATGGCCTTGAAGAACAAGGCAGCCAAGGGCAGTGCCACCAAAGACTTCTCCGTGTTTT
TCCAGAAGATCCGGGAGACTGGGGAAAGACCTAGCAATGAGGAAATCATGCGTTTTTCTAAGTTGTTTGAAGATGAGCTG
ACCCTGGATAACCTGACGCGGCCGCAGCTGGTGGCACTGTGCAAACTCCTGGAGCTGCAGTCCATCGGCACCAACAACTT
CCTGCGCTTCCAGCTCACCATGCGGCTGCGGTCCATAAAGGCCGATGACAAGCTGATTGCTGAGGAAGGAGTGGACAGCC
TCAATGTCAAGGAATTGCAAGCAGCATGTCGGGCACGGGGCATGCGGGCCCTTGGCGTCACAGAAGACCGTCTGAGGGAC
CAGCTGAAGCAGTGGCTGGACCTGCACTTGCACCAGGAGATCCCCACGTCGCTGCTCATACTGTCCCGAGCCATGTACCT
CCCGGACACCCTCTCACCTGCCGACCAGCTCAAATCCACGCTGCAGACCCTTCCAGAGATAGTGGCAAAGGAAGCCCAGG
TAAAAGCCGCTGAGCTGGAGGGTGAGCAGGTGGACAACAAGGCAAAGCTGGAGGCCACCCTGCAGGAGGAGGCGGCTATC
CAGCAGGAGCATCGGGAGAAGGAGCTGCAGAAGCTCTCACAGGCAGTGGTGACACAAGTTCAGAAGGACGTTGAGCTGGA
AGCTGCCCCTGGGAGGCCAGTGGCTGGGCCACAGCCAGTGGCTGAGCCACAGCCAGAAGTGCCTGATGTGACCCTGCAGT
CAGAGACCCTGGAGGACACTGCCCCAGTGCTAGAGGGCTTGAAGGAAGAGGAGATAACGAAAGAAGAGATCGACATCCTC
AGCGACGCATGCTCGAAGCTGAAGGACCAGAAGAAGTCGCTCACCAAGGAGAAAGAGGAGCTCGAGCTGCTGAAAGGGGA
TGTCCAGGACTATAGCGAGGACTTACAAGAGATCAAAAAGGAACTTTCCAAGACTGGTGAAGAGAAATATGTAGAAGAAT
CTAAAGCCAGCAAGAGGCTGACAAAGAGGGTGCAGCAGATGATCGGGCAGATTGACGGCCTCATTACACAGCTAGAGGCG
GGTCAGCGGGCTGGCCGGCTGGGCCCCACTGAGGGGACGACCACGGGGGAGAACGTCATTAGCGTCACTGAGCTCATCAG
TGCCATGAAGCAGATCAAGCACATTCCGGAAAACAAACTGCTCAGCCTGGCCTCAGCACTAGATGAAAACAAGGATGGCA
AGATCAACATCGACGACCTCGTCAAGGTGATTGAGCTGGTGGACAAAGAAGATGTTCATGTCTCTACTAGCCAGGTGGCT
GAGATTGTGGCAACGCTGGAGAAGGAAGAGAAGGTGGAAGAGAAGGAGAAGGCCAAGGAGAAGGCAGAGAAGGAGGCCGC
AGAGGTGAAGAACTAG
ATGGCGTCCATCTTACTTAGGAGCTGCCGCGGCCGGGGGCCTGCCCGCCTCCCGCCACCTCGCGCCGCGGCCTCGCGGGG
TGGTCTGGAGGATCCTGCTTGTCTCAGTTGTGCCAACACAGGGCTGCGAAGCCTGGTGGGGTTGAGAAGCCTTGTGAATG
TTCCGATGGGCTGCTATACTCCGGGCCACCTTGCGTACCTTTCTCTTAGAGGTGTTCATCGTGGCTGTTGGACTCTGAGG
CTTGAGTGTCCACGCACAGTGGCAAGAGCACCATGGACTCCTGCCATGGGGGGGTTGGTTGTCGCAGGGCCCCAGTGCCT
TCCGTTGCGTGGCTGGCACTCATCGACTCCCCTCAGTGACGATTCTATGGTGGAGAAGTCCCTCAGATCATTGAAGGACA
AGAACAAGAAACTGGAGGAGGGGGGGCCAGTGTATAGCCCCCCTGCGGAGGTGGTGGTGAAGAAATCCCTCGGGCAGAGG
GTACTAGATGAACTGAAGCACTACTACCACGGCTTCCGCCTGCTCTGGATCGACACCAAGATCGCTGCGCGCATGCTCTG
GCGTATCCTCAATGGCCACAGCCTGACCCGCCGGGAGCGCAGGCAGTTTCTCCGGATCTGTGCCGACCTCTTCCGCCTGG
TGCCCTTCCTTGTGTTTGTGGTGGTGCCCTTCATGGAGTTCCTGCTACCAGTGGCCGTGAAACTATTCCCCAACATGTTG
CCATCCACATTTGAGACCCAGTCCATCAAGGAGGAGAGGCTAAAGAAGGAGCTTCGGGTCAAGCTAGAGCTGGCCAAGTT
CCTCCAGGACACCATTGAAGAGATGGCCTTGAAGAACAAGGCAGCCAAGGGCAGTGCCACCAAAGACTTCTCCGTGTTTT
TCCAGAAGATCCGGGAGACTGGGGAAAGACCTAGCAATGAGGAAATCATGCGTTTTTCTAAGTTGTTTGAAGATGAGCTG
ACCCTGGATAACCTGACGCGGCCGCAGCTGGTGGCACTGTGCAAACTCCTGGAGCTGCAGTCCATCGGCACCAACAACTT
CCTGCGCTTCCAGCTCACCATGCGGCTGCGGTCCATAAAGGCCGATGACAAGCTGATTGCTGAGGAAGGAGTGGACAGCC
TCAATGTCAAGGAATTGCAAGCAGCATGTCGGGCACGGGGCATGCGGGCCCTTGGCGTCACAGAAGACCGTCTGAGGGAC
CAGCTGAAGCAGTGGCTGGACCTGCACTTGCACCAGGAGATCCCCACGTCGCTGCTCATACTGTCCCGAGCCATGTACCT
CCCGGACACCCTCTCACCTGCCGACCAGCTCAAATCCACGCTGCAGACCCTTCCAGAGATAGTGGCAAAGGAAGCCCAGG
TAAAAGCCGCTGAGCTGGAGGGTGAGCAGGTGGACAACAAGGCAAAGCTGGAGGCCACCCTGCAGGAGGAGGCGGCTATC
CAGCAGGAGCATCGGGAGAAGGAGCTGCAGAAGCTCTCACAGGCAGTGGTGACACAAGTTCAGAAGGACGTTGAGCTGGA
AGCTGCCCCTGGGAGGCCAGTGGCTGGGCCACAGCCAGTGGCTGAGCCACAGCCAGAAGTGCCTGATGTGACCCTGCAGT
CAGAGACCCTGGAGGACACTGCCCCAGTGCTAGAGGGCTTGAAGGAAGAGGAGATAACGAAAGAAGAGATCGACATCCTC
AGCGACGCATGCTCGAAGCTGAAGGACCAGAAGAAGTCGCTCACCAAGGAGAAAGAGGAGCTCGAGCTGCTGAAAGGGGA
TGTCCAGGACTATAGCGAGGACTTACAAGAGATCAAAAAGGAACTTTCCAAGACTGGTGAAGAGAAATATGTAGAAGAAT
CTAAAGCCAGCAAGAGGCTGACAAAGAGGGTGCAGCAGATGATCGGGCAGATTGACGGCCTCATTACACAGCTAGAGGCG
GGTCAGCGGGCTGGCCGGCTGGGCCCCACTGAGGGGACGACCACGGGGGAGAACGTCATTAGCGTCACTGAGCTCATCAG
TGCCATGAAGCAGATCAAGCACATTCCGGAAAACAAACTGCTCAGCCTGGCCTCAGCACTAGATGAAAACAAGGATGGCA
AGATCAACATCGACGACCTCGTCAAGGTGATTGAGCTGGTGGACAAAGAAGATGTTCATGTCTCTACTAGCCAGGTGGCT
GAGATTGTGGCAACGCTGGAGAAGGAAGAGAAGGTGGAAGAGAAGGAGAAGGCCAAGGAGAAGGCAGAGAAGGAGGCCGC
AGAGGTGAAGAACTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001859 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000168924 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000002923 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000000067 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000014533 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000014167 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_20 | 75.15 | 86.86 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOGAG00000014883 retrocopies