Parental gene: | LETM1, ENSSTOG00000014167 |
| Aliases: | None |
| Description: | leucine zipper-EF-hand containing transmembrane protein 1 [Source:HGNC Symbol;Acc:6556] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393287.1:21550120..21587401(+) |
>ENSSTOG00000014167
ATGGCGTCCATCTTGCTGAGAAGCTGTCGCGGCCGGGGCCCAGCGCTCCTCCCGCCGCCCCGCGCCGCAGCCTCGCGGGG
TAGTCTGGGGCACCGGCATCGTGCTTGTCTCAGTTGTGCCAGCACTGTGGGGCTGATAAGCCGCTCGAATATTTCATCTG
GCTGCTGCTTTCCAGCCCACCCTGTGTACCTCTGCTTCAGAGATGAGCCCCTCAGTGTTTGGACTTTGAGGCCCAAGCAC
CCACGCACAGCAGTGAGAGTGCCATGGACCCCCACTTCAGCAGGCTTGGTTGTTACAGGACCTCGGTACCTTTCTATGCG
AGGCTGGCACTCATCACCCCCTCTTAGTGATGACTCTGTGGTGGAGAAGTCCCTCAAATCCTTAAAGGACAAGAATAAGA
AGCTGGAGGAGGGTGGCCCTGTGTACAGCCCACCAGCTGAGGTGGTGGTGAAGAAGTCTCTTGGGCAGAAGGTGTTGGAT
GAGCTGAAGCATTACTACCATGGCTTCCGTTTGCTCTGGATCGATACCAAGATTGCAGCACGCATGCTGTGGCGCATCCT
CAATGGCCACACCCTGACCCGCCGGGAGCGCAGGCAGTTTCTCCGGATCTGTGCTGACCTCTTCAGACTGGTCCCTTTCC
TGGTCTTCGTGGTGGTGCCCTTTATGGAATTTCTGCTGCCTGTGGCCGTGAAGCTCTTCCCCAACATGCTGCCATCCACC
TTTGAGACCCAGTCCATCAAGGAGGAGAGGCTGAAGAAGGAGCTACGGGTCAAGCTGGAGCTGGCCAAGTTCCTACAAGA
CACTATTGAGGAGATGGCCCTGAAGAACAAGGCAGCCAAGGGAAACGCCACCAAAGACTTCTCTGCATTTTTCCAGAAGA
TCCGGGAGACAGGAGAAAGACCCAGCAATGAGGAAATCATGCGGTTTTCCAAATTGTTTGAGGATGAGCTGACTCTGGAT
AACCTCACACGACCACAACTGGTGGCACTGTGCAGGCTGCTGGAACTCCAATCCATCGGCACCAACAACTTTCTGCGCTT
CCAGCTCACCATGAGGCTGAGGTCCATAAAGGCTGATGACAAGCTGATTGCTGAGGAAGGGGTGGACAGCCTGAACGTCA
AGGAACTGCAGGCAGCGTGTCGGGCGCGAGGCATGCGGGCCCTTGGCGTCACAGAAGAACGTTTGCGGGGACAGTTGAAG
CAGTGGCTGGACCTGCACCTGCACCACGAGATCCCCACGTCACTGCTCATCCTGTCCCGTGCCATGTACCTCCCAGACAC
TCTCTCGCCTGCTGACCAGCTCAAATCCACACTGCAAACCCTCCCGGAAATTGTGGCAAAGGAAGCCCAGATGAAGGTGG
CAGAGGTGGAGGGTGAGCAGGTGGACAACAAAGTAAAACTGGAGGCCACGCTGCAGGAAGAGGCCGCCATCCAGCAGGAG
CACCGGGAGAAGGAACTGCAGAGGGCCGCAGAGGCAGCAAAGGACATTGAGCTGGAAGGAGTGGAAGCTGCCACCCCTGG
GAGGCCAGTGGTTGAGCCAAAGCCAGAGGTGCCTGATGTGATCCTGCCCACAGAGGCCCTGAAGGATATTGCTCCAGTGC
TAGAGGGTGTGAAGGAAGAGGAAATAACTCAGGAAGAAATTGATGTCCTCAGTGACGCTTGCTCCAAGCTGCAGGAGCAG
AAGTCATCTCTGACCAAGGAAAAGGAGGAACTGGAGCTGCTGAAAGAGGACGTCCAGGACTACAATGAGGACTTGCAAGA
GATCAAGAAGGAGCTTTCTAAGACCGGTGAAGAAGAATTAGTGGAAGAATCTAAAGCCAGCAAGAGACTAACAAAGCGTG
TGCAGCAGATGATTGGGCAGATCGATGGCCTGATTGCACAGCTAGAGACGGGTCAGCAGGCCGGCAAGCTGGGCCCTGCC
CAGGGCTCAGCTGTGGGGGAGAATGTTGTCAGCGTCACTGAGCTCATCAACGCCATGAAGCAAATCAAGCACATTCCAGA
AAGCAAGCTGGTGAGCTTGGCCTCAGCACTGGATGAAAACAAGGATGGCAAGGTCAACATCGATGACCTCGTCAAGGTTA
TCGAGCTGGTGGACAAAGAAGATGTCCACATCTCCACTAGCCAGGTGGCTGAGATTGTGGCCGTGCTGGAGAAGGAGGAG
AAGGTGGAAGAGAAGGAGAAGGCCAAGGGCAAGGCTGAGAAGGAGGCTGCAGAGGTGAAGAACTAA
ATGGCGTCCATCTTGCTGAGAAGCTGTCGCGGCCGGGGCCCAGCGCTCCTCCCGCCGCCCCGCGCCGCAGCCTCGCGGGG
TAGTCTGGGGCACCGGCATCGTGCTTGTCTCAGTTGTGCCAGCACTGTGGGGCTGATAAGCCGCTCGAATATTTCATCTG
GCTGCTGCTTTCCAGCCCACCCTGTGTACCTCTGCTTCAGAGATGAGCCCCTCAGTGTTTGGACTTTGAGGCCCAAGCAC
CCACGCACAGCAGTGAGAGTGCCATGGACCCCCACTTCAGCAGGCTTGGTTGTTACAGGACCTCGGTACCTTTCTATGCG
AGGCTGGCACTCATCACCCCCTCTTAGTGATGACTCTGTGGTGGAGAAGTCCCTCAAATCCTTAAAGGACAAGAATAAGA
AGCTGGAGGAGGGTGGCCCTGTGTACAGCCCACCAGCTGAGGTGGTGGTGAAGAAGTCTCTTGGGCAGAAGGTGTTGGAT
GAGCTGAAGCATTACTACCATGGCTTCCGTTTGCTCTGGATCGATACCAAGATTGCAGCACGCATGCTGTGGCGCATCCT
CAATGGCCACACCCTGACCCGCCGGGAGCGCAGGCAGTTTCTCCGGATCTGTGCTGACCTCTTCAGACTGGTCCCTTTCC
TGGTCTTCGTGGTGGTGCCCTTTATGGAATTTCTGCTGCCTGTGGCCGTGAAGCTCTTCCCCAACATGCTGCCATCCACC
TTTGAGACCCAGTCCATCAAGGAGGAGAGGCTGAAGAAGGAGCTACGGGTCAAGCTGGAGCTGGCCAAGTTCCTACAAGA
CACTATTGAGGAGATGGCCCTGAAGAACAAGGCAGCCAAGGGAAACGCCACCAAAGACTTCTCTGCATTTTTCCAGAAGA
TCCGGGAGACAGGAGAAAGACCCAGCAATGAGGAAATCATGCGGTTTTCCAAATTGTTTGAGGATGAGCTGACTCTGGAT
AACCTCACACGACCACAACTGGTGGCACTGTGCAGGCTGCTGGAACTCCAATCCATCGGCACCAACAACTTTCTGCGCTT
CCAGCTCACCATGAGGCTGAGGTCCATAAAGGCTGATGACAAGCTGATTGCTGAGGAAGGGGTGGACAGCCTGAACGTCA
AGGAACTGCAGGCAGCGTGTCGGGCGCGAGGCATGCGGGCCCTTGGCGTCACAGAAGAACGTTTGCGGGGACAGTTGAAG
CAGTGGCTGGACCTGCACCTGCACCACGAGATCCCCACGTCACTGCTCATCCTGTCCCGTGCCATGTACCTCCCAGACAC
TCTCTCGCCTGCTGACCAGCTCAAATCCACACTGCAAACCCTCCCGGAAATTGTGGCAAAGGAAGCCCAGATGAAGGTGG
CAGAGGTGGAGGGTGAGCAGGTGGACAACAAAGTAAAACTGGAGGCCACGCTGCAGGAAGAGGCCGCCATCCAGCAGGAG
CACCGGGAGAAGGAACTGCAGAGGGCCGCAGAGGCAGCAAAGGACATTGAGCTGGAAGGAGTGGAAGCTGCCACCCCTGG
GAGGCCAGTGGTTGAGCCAAAGCCAGAGGTGCCTGATGTGATCCTGCCCACAGAGGCCCTGAAGGATATTGCTCCAGTGC
TAGAGGGTGTGAAGGAAGAGGAAATAACTCAGGAAGAAATTGATGTCCTCAGTGACGCTTGCTCCAAGCTGCAGGAGCAG
AAGTCATCTCTGACCAAGGAAAAGGAGGAACTGGAGCTGCTGAAAGAGGACGTCCAGGACTACAATGAGGACTTGCAAGA
GATCAAGAAGGAGCTTTCTAAGACCGGTGAAGAAGAATTAGTGGAAGAATCTAAAGCCAGCAAGAGACTAACAAAGCGTG
TGCAGCAGATGATTGGGCAGATCGATGGCCTGATTGCACAGCTAGAGACGGGTCAGCAGGCCGGCAAGCTGGGCCCTGCC
CAGGGCTCAGCTGTGGGGGAGAATGTTGTCAGCGTCACTGAGCTCATCAACGCCATGAAGCAAATCAAGCACATTCCAGA
AAGCAAGCTGGTGAGCTTGGCCTCAGCACTGGATGAAAACAAGGATGGCAAGGTCAACATCGATGACCTCGTCAAGGTTA
TCGAGCTGGTGGACAAAGAAGATGTCCACATCTCCACTAGCCAGGTGGCTGAGATTGTGGCCGTGCTGGAGAAGGAGGAG
AAGGTGGAAGAGAAGGAGAAGGCCAAGGGCAAGGCTGAGAAGGAGGCTGCAGAGGTGAAGAACTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001859 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000168924 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000002923 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000000067 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000014883 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000014533 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_160 | 72.82 | 55.60 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000014167 retrocopies