Parental gene:

USP12, ENSOGAG00000030639

Aliases:None
Description:ubiquitin specific peptidase 12 [Source:HGNC Symbol;Acc:20485]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873639.1:5332627..5382181(+)


>ENSOGAG00000030639
ATGATGATTCTTTTTTTTCTTCCGTCATTTCTTAGCTTTTGCATGAAGCAGGGCGCCAATGCTTCGGCATTAGAGAAAGA
GATTGGTCCAGAACAGTTTCCAGTCAATGAGCACTATTTTGGATTAGTCAATTTTGGGAATACCTGCTACTGCAATTCAG
TTCTTCAAGCACTTTATTTTTGTCGTCCATTTCGGGAAAAAGTTCTAGCCTACAAGAGTCAACCTAGGAAGAAGGAGAAC
CTTCTTACATGCTTAGCAGATCTCTTCCATAGCATAGCCACTCAGAAGAAAAAGGTTGGAGTAATACCTCCTAAGAAATT
CATAACAAGGTTACGGAAAGAAAATGAACTTTTTGACAACTACATGCAACAAGATGCTCATGAATTCTTAAATTACCTAC
TAAATACAATTGCTGATATTTTACAAGAAGAGAGAAAGCAAGAAAAACAAAATGGTCGCTTACCTAACGGCAATATCGAT
AGTGAAAATAACAACAGCACACCAGACCCAACGTGGGTTCATGAGATTTTTCAGGGAACATTAACTAATGAAACCAGATG
TCTTACTTGTGAAACTATAAGCAGCAAAGATGAAGATTTTTTAGACCTTTCTGTTGACGTGGAACAGAACACATCAATTA
CTCACTGTTTAAGGGGTTTTAGCAACACAGAGACTCTATGCAGTGAATACAAATATTACTGTGAAGAGTGTCGCAGCAAA
CAGGAAGCACACAAACGGATGAAAGTTAAAAAACTGCCCATGATTCTAGCTCTACACCTGAAGAGATTTAAATATATGGA
TCAGCTTCATCGATATACAAAACTTTCTTACCGGGTAGTTTTTCCTTTAGAACTTCGTCTATTTAACACTTCAGGAGACG
CAACCAATCCAGACAGAATGTACGACCTTGTTGCTGTTGTGGTTCACTGTGGAAGTGGTCCCAACCGAGGCCATTATATT
GCAATAGTTAAGAGTCATGATTTTTGGTTGTTGTTTGATGACGACATTGTAGAAAAAATAGATGCACAAGCTATTGAAGA
ATTCTACGGGTTGACATCAGATATCTCAAAGAACTCTGAGTCTGGTTACATCCTTTTCTATCAGTCTCGGGATTGA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000019344 ortholog_one2one 5 retrogenes
retro_cjac_2734, retro_cjac_3901, retro_cjac_3964, retro_cjac_3965, retro_cjac_4011,
Homo sapiens ENSG00000152484 ortholog_one2one 4 retrogenes
retro_hsap_2328, retro_hsap_3266, retro_hsap_4726, retro_hsap_4918,
Microcebus murinus ENSMICG00000006269 ortholog_one2one 2 retrogenes
retro_mmur_1167, retro_mmur_1187,
Macaca mulatta ENSMMUG00000021425 ortholog_one2many 1 retrogene
retro_mmul_937,
Nomascus leucogenys ENSNLEG00000000323 ortholog_one2many 3 retrogenes
retro_nleu_1817, retro_nleu_1995, retro_nleu_2426,
Otolemur garnettii ENSOGAG00000009357 within_species_paralog 1 retrogene
retro_ogar_3339,
Pongo abelii ENSPPYG00000005232 ortholog_one2one 3 retrogenes
retro_pabe_2110, retro_pabe_2705, retro_pabe_3672,
Pan troglodytes ENSPTRG00000005727 ortholog_one2one 3 retrogenes
retro_ptro_1701, retro_ptro_2209, retro_ptro_3143,
Tupaia belangeri ENSTBEG00000012960 ortholog_one2one 2 retrogenes
retro_tbel_3285, retro_tbel_4692,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_2897 79.71 74.12
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Download FASTA sequences of all ENSOGAG00000030639 retrocopies