Parental gene: | USP12, ENSTBEG00000012960 |
| Aliases: | None |
| Description: | ubiquitin specific peptidase 12 [Source:HGNC Symbol;Acc:20485] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | GeneScaffold_2328:615218..665949(-) |
>ENSTBEG00000012960
GGCGCCAATTCGGCATTAGAGAAAGAGATTGGTTCAGGACAGTTTCCAGTCAACGAGCACTATTTTTTAGTCAATTTTGG
GAATACCTGCTACTGCAATTCAGTTCTTCAAGCACTTTATTTTTGTCGTCCATTTCGGGAAAAAGTTCTAGCATACAAGA
GTCAACCTAGGAAGAAGGAGAACCTTCTTACATGCTTAGCAGATCTCTTCCATAGCATAGCCACTCAGAAGAAAAAGGTT
GGAGTGATACCGCCCAAGAAGTTCATAACAAGATTGCGGAAAGAGAATGAACTTTTTGACAACTACATGCAGCAAGATGC
CCATGAATTCTTAAATTACCTACTAAATACAATTGCTGATATTTTACAAGAAGAGAGGAAGCAGGAGAAACAGAATGGCC
GCTTACCTAATGGTAACATTGATAGTGAAAACAACAACAGCACACCAGACCCAACATGGGTTCATGAGATTTTTCAGGGA
ACATTAACTAATGAAACCAGATGTCTTACTTGTGAAACTATAAGCAGTAAAGATGAAGATTTTTTAGATCTTTCTGTTGA
CGTGGAACAAAACACATCAATTACTCACTGTTTAAGGGGTTTTAGCAACACAGAAACACTATGCAGTGAATACAAATATT
ACTGTGAAGAGTGTCGCAGCAAACAGGAAGCACACAAACGAATGAAAGTTAAAAAACTGCCCATGATTCTAGCTCTGCAC
CTGAAGAGATTTAAATATATGGATCAACTTCATCGATATACAAAACTTTCTTACCGGGTAGTTTTTCCTTTAGAACTTCG
TCTGTTCAACACTTCAGGCGATGCAACCAATCCTGACAGGATGTACGACCTGGTCGCCGTTGTGGTGCACTGTGGAAGTG
GTCCCAATCGAGGACATTATATTGCAATAGTTAAGAGTCATGATTTTTGGTTGTTGTTCGATGATGACATTGTTGAAAAA
ATAGATGCACAAGCTATTGAAGAATTCTACGGGTTGACATCAGATATCTCAAAGAACTCTGAATCTGGTTACATTCTTTT
CTACCAGTCTCGGGACTGA
GGCGCCAATTCGGCATTAGAGAAAGAGATTGGTTCAGGACAGTTTCCAGTCAACGAGCACTATTTTTTAGTCAATTTTGG
GAATACCTGCTACTGCAATTCAGTTCTTCAAGCACTTTATTTTTGTCGTCCATTTCGGGAAAAAGTTCTAGCATACAAGA
GTCAACCTAGGAAGAAGGAGAACCTTCTTACATGCTTAGCAGATCTCTTCCATAGCATAGCCACTCAGAAGAAAAAGGTT
GGAGTGATACCGCCCAAGAAGTTCATAACAAGATTGCGGAAAGAGAATGAACTTTTTGACAACTACATGCAGCAAGATGC
CCATGAATTCTTAAATTACCTACTAAATACAATTGCTGATATTTTACAAGAAGAGAGGAAGCAGGAGAAACAGAATGGCC
GCTTACCTAATGGTAACATTGATAGTGAAAACAACAACAGCACACCAGACCCAACATGGGTTCATGAGATTTTTCAGGGA
ACATTAACTAATGAAACCAGATGTCTTACTTGTGAAACTATAAGCAGTAAAGATGAAGATTTTTTAGATCTTTCTGTTGA
CGTGGAACAAAACACATCAATTACTCACTGTTTAAGGGGTTTTAGCAACACAGAAACACTATGCAGTGAATACAAATATT
ACTGTGAAGAGTGTCGCAGCAAACAGGAAGCACACAAACGAATGAAAGTTAAAAAACTGCCCATGATTCTAGCTCTGCAC
CTGAAGAGATTTAAATATATGGATCAACTTCATCGATATACAAAACTTTCTTACCGGGTAGTTTTTCCTTTAGAACTTCG
TCTGTTCAACACTTCAGGCGATGCAACCAATCCTGACAGGATGTACGACCTGGTCGCCGTTGTGGTGCACTGTGGAAGTG
GTCCCAATCGAGGACATTATATTGCAATAGTTAAGAGTCATGATTTTTGGTTGTTGTTCGATGATGACATTGTTGAAAAA
ATAGATGCACAAGCTATTGAAGAATTCTACGGGTTGACATCAGATATCTCAAAGAACTCTGAATCTGGTTACATTCTTTT
CTACCAGTCTCGGGACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000019344 | ortholog_one2one | 5 retrogenes | |
| Homo sapiens | ENSG00000152484 | ortholog_one2one | 4 retrogenes | |
| Microcebus murinus | ENSMICG00000006269 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000021425 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000323 | ortholog_one2many | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000030639 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005232 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000005727 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_3285 | 70.91 | 92.33 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tbel_4692 | 73.95 | 60.51 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000012960 retrocopies