Parental gene: | PAIP1, ENSOPRG00000000386 |
| Aliases: | None |
| Description: | poly(A) binding protein interacting protein 1 [Source:HGNC Symbol;Acc:16945] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_2992:110367..147116(-) |
>ENSOPRG00000000386
ATGTCGGACGGTTTCGATCGGGCCCCAGGTGCTGGTCGGGGCCGGAGCCGGGGCCTGGGCCGCGGAGGGGGCGGGCCTGA
GGGCGGCGGTTTTCCGAACGGAGCAGGGCCTGCTGAGCGGACGCGGCATTTGCCGCCGCCGCCGCCGCAGCCCAAAGCCT
CGGGCTTCCAGCAGCCGCCGCCGCTGCGCCAGCCCAGGACGGCCCCGCCGCCAGGGGTCCAGTGCGAGGCCCCGGCCGGC
TCCCAGCGGCCTCCCCAGCCCGGGGCGCTCCCAGAACAAGCAAGACCCCTGAGAGCTCCACCTACTTCACAGGAGAAAAT
CCCACAGCAGATCTCGGAGTCAGCAATGGCTAAACCCCAGGTGGTTGTAGCGCCGGTGTTAATGTCCAAGCTGTCTGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATCTTATGAAGATGGGTGTGAGGAATATCCCACT
CTATCAGAGTATGTTCAGGACTTTTTGAATCATCTCACAGAACAGCCTGGCAGTTTTGAAACTGAAATTGAACAGTTTGC
AGAGACCCTGAACGGTTGGGTTACAACAGATGATGCTTTGCAAGAACTTGTCGAACTCATCTATCAACAGGCTACGTCTA
TCCCAAATTTCTCTTACATGGGAGCTCGCCTGTGTAATTACTTGTCCCATCATCTGACAATTAGCCCACAGAGTGGCAAC
TTTCGTCAATTGCTACTTCAAAGGTGTCGGACTGAGTATGAAGTGAAAGATCAAGCTGCGAAAGGGGATGAAGTGACTCG
GAAACGGTTTCATGCATTTGTCCTCTTCCTCGGAGAACTCTTCCTTAACCTGGAGATCAAGGGAACAAATGGACAGGTTA
TGAGAGCAGATATTCTTCAAGTTGGTCTTCGAGAGTTGCTGAATGCGCTTTTTTCTAATCCTATGGATGACAATTTAATC
TGTGCAGTGAAATTACTGAAGTTGACAGGATCCGTTTTGGAAGATGCCTGGAAGGAAAAAGCCAAGACTGATATGGAAGA
AATTATTCAGAGAATTGAAAATGTTGTCCTCGATGCTAACTGCAGCAGAGACGTAAAGCAGATGCTGCTGAAGCTGGTGG
AGCTGCGGTCAAGTAACTGGGGTAGAGTCCATGCAACTTCAACCTACAGAGAAGCAACACCTGAGAATGATCCTAACTAC
TTCATGAATGAACCAACATTTTATACATCCGATGGTGTTCCTTTCACCGCAGCTGATCCAGATTACCAAGAGAAATATCA
AGAATTACTTGAACGAGAAGATTTTTTCCCAGATTATGAAGAAAATGGAACAGATTTATCCGGGGCTGGTGATCCATACT
TGGATGATATTGATGATGAGATGGACCCAGAGATAGAAGCTTATGAAAAGTTTTGTTTGGAATCAGAGCGTAAGCGAAAG
CAATAA
ATGTCGGACGGTTTCGATCGGGCCCCAGGTGCTGGTCGGGGCCGGAGCCGGGGCCTGGGCCGCGGAGGGGGCGGGCCTGA
GGGCGGCGGTTTTCCGAACGGAGCAGGGCCTGCTGAGCGGACGCGGCATTTGCCGCCGCCGCCGCCGCAGCCCAAAGCCT
CGGGCTTCCAGCAGCCGCCGCCGCTGCGCCAGCCCAGGACGGCCCCGCCGCCAGGGGTCCAGTGCGAGGCCCCGGCCGGC
TCCCAGCGGCCTCCCCAGCCCGGGGCGCTCCCAGAACAAGCAAGACCCCTGAGAGCTCCACCTACTTCACAGGAGAAAAT
CCCACAGCAGATCTCGGAGTCAGCAATGGCTAAACCCCAGGTGGTTGTAGCGCCGGTGTTAATGTCCAAGCTGTCTGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATCTTATGAAGATGGGTGTGAGGAATATCCCACT
CTATCAGAGTATGTTCAGGACTTTTTGAATCATCTCACAGAACAGCCTGGCAGTTTTGAAACTGAAATTGAACAGTTTGC
AGAGACCCTGAACGGTTGGGTTACAACAGATGATGCTTTGCAAGAACTTGTCGAACTCATCTATCAACAGGCTACGTCTA
TCCCAAATTTCTCTTACATGGGAGCTCGCCTGTGTAATTACTTGTCCCATCATCTGACAATTAGCCCACAGAGTGGCAAC
TTTCGTCAATTGCTACTTCAAAGGTGTCGGACTGAGTATGAAGTGAAAGATCAAGCTGCGAAAGGGGATGAAGTGACTCG
GAAACGGTTTCATGCATTTGTCCTCTTCCTCGGAGAACTCTTCCTTAACCTGGAGATCAAGGGAACAAATGGACAGGTTA
TGAGAGCAGATATTCTTCAAGTTGGTCTTCGAGAGTTGCTGAATGCGCTTTTTTCTAATCCTATGGATGACAATTTAATC
TGTGCAGTGAAATTACTGAAGTTGACAGGATCCGTTTTGGAAGATGCCTGGAAGGAAAAAGCCAAGACTGATATGGAAGA
AATTATTCAGAGAATTGAAAATGTTGTCCTCGATGCTAACTGCAGCAGAGACGTAAAGCAGATGCTGCTGAAGCTGGTGG
AGCTGCGGTCAAGTAACTGGGGTAGAGTCCATGCAACTTCAACCTACAGAGAAGCAACACCTGAGAATGATCCTAACTAC
TTCATGAATGAACCAACATTTTATACATCCGATGGTGTTCCTTTCACCGCAGCTGATCCAGATTACCAAGAGAAATATCA
AGAATTACTTGAACGAGAAGATTTTTTCCCAGATTATGAAGAAAATGGAACAGATTTATCCGGGGCTGGTGATCCATACT
TGGATGATATTGATGATGAGATGGACCCAGAGATAGAAGCTTATGAAAAGTTTTGTTTGGAATCAGAGCGTAAGCGAAAG
CAATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000020376 | possible_ortholog | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000002525 | ortholog_one2one | 2 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000009651 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000011203 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_185 | 94.33 | 69.23 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_469 | 94.33 | 69.23 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000000386 retrocopies