Parental gene:

ENSEEUG00000009651

Aliases:None
Description:None
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_7065:543..16584(-)


>ENSEEUG00000009651
GCTACGTCTGTCCCAAATTTCTCTTACATGGGAGCTCGTCTGTGTAATTACCTGTCCCATCATCTGACAATTAGCCCACA
GAGTGGTAACTTCCGCCAGTTGCTCCTTCAAAGATGCCGGACTGAATACGAAGCTAAAGATCAAGCTGCCAAAGGGGATG
AAATGACTCGAAAACGATTCCATGCATTTGTCCTCTTTCTGGGGGAGCTTTATCTTAACCTAGAGATCAAGGGAACAAAT
GGACAGGTTACAAGAGCAGATATTCTCCAGGCTGGTCTCCGGGAGTTGCTGAATGCCCTCTTTTCTAACCCTGTGGATGA
CAACGTGATTTGTGCAGTGAAATTACTGAAGTTGACTGGATCGGTTTTGGAAGATGCCTGGAAGGAAAAAGGAAAGAACG
ATATGGAAGAAATTAATCAGAGAATTGAAAACGTTGTCCTAGATGCAAATTGCAGCAGAGATGTGAAGCAGATGCTCTTG
AAACTTGTAGAGCTTCGGTCAAGCAATTGGGGTAGAGTCCACGCAACGTCAACTTACAGAGAAGCAACCCCCGAAAATGA
CCCAAACTACTTCATGAATGAACCAACATTTTATACATCTGATGGTGTTCCTTTCACTGCAGCTGATCCAGATTACCAAG
AAAAATATCAAGAGTTACTTGAAAGAGAAGACTTTTTTCCAGATTATGAAGAAAATGGAACAGATTTATCAGGGGCTGGT
GATCCATACTTGGATGATATTGATGATGAGATGGACCCAGAGATAGAAGAAGCTTATGAAAAGTTTTGTTTGGAATCAGA
GCGTAAGCGAAAACAGTAA

Library Parental gene expression (RPM)
SRP017611_liver 72 .03 RPM
SRP017611_kidney 120 .40 RPM
SRP017611_brain 116 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020376 possible_ortholog 1 retrogene
retro_btau_359,
Choloepus hoffmanni ENSCHOG00000004961 possible_ortholog 1 retrogene
retro_chof_762,
Callithrix jacchus ENSCJAG00000001340 possible_ortholog 2 retrogenes
retro_cjac_3224, retro_cjac_3337,
Cavia porcellus ENSCPOG00000002525 possible_ortholog 2 retrogenes
retro_cpor_133, retro_cpor_197,
Homo sapiens ENSG00000172239 possible_ortholog 1 retrogene
retro_hsap_1726,
Otolemur garnettii ENSOGAG00000001887 possible_ortholog 2 retrogenes
retro_ogar_1096, retro_ogar_1241,
Ochotona princeps ENSOPRG00000000386 possible_ortholog 2 retrogenes
retro_opri_185, retro_opri_469,
Ictidomys tridecemlineatus ENSSTOG00000011203 possible_ortholog 1 retrogene
retro_itri_234,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_304 76.97 55.15
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Download FASTA sequences of all ENSEEUG00000009651 retrocopies