Parental gene: | RFFL, ENSOPRG00000011769 |
| Aliases: | None |
| Description: | ring finger and FYVE-like domain containing E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:24821] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_3783:231104..247736(-) |
>ENSOPRG00000011769
ATGTGGGCAACCTGCTGCAACTGGTTCTGCCTGGATGGACAGCCTGAGGAGGTGCCAGCATCCCAGGGGGCCAGGACACA
AGCCTATTCCAACCCTGGGTACAGCTCCTTCCCTTCACCGACGGGCTCAGAACCAAGCTGCAAGTCCTGTGGGACCCACT
TCACCAACATGGCCAGGAAGCAGACCTGCTTGGACTGTAAGAAGAATTTCTGCCTGACCTGTTCGAACCAGGTGGGGAAT
GGGCCCCGCCTCTGCCTGCTCTGCCAACGGTTCCGAGCCACAGCCTTTCAGCGTGAGGAGCTCATGAAGATGAAGGTGAA
GGACCTGAGGGACTATCTCAGCCTCCATGACATTTCCACGGAGATGTGCCGGGAGAAGGAAGAGCTGGTGTTCTTGGTGC
TTGGCCAGCAGCCTGCAGTCCCACAGGAGGGCAGGACTCGTGCCTTGTCCCCGGACTCGCCCGAGCAGCAGGCCTTCCTG
AGCCAGCCGCACGCCAGCACAATACCTCCTACCTCGGCCAGCCTCCCACCCTCCCCTGCACAGGCCACCTCTGTTCCCCC
AGCCCAGGCGCAGGAACGCCAGCAGGCCAATGGCCATGTGTCTCAGGACCAAGAGGAGCCCGTCTGCCTGGAGGGCACAG
CCACAGCATCTGTTGAGGATGAGACCCAGTCTCTTGACTCAGAGGACAGCTTTGTCCCAGGCCGGAGGGCCTCTCTGTCT
GACTTGACCCACCTAGAGGACATTGAAGGCCTGACCGTGCGGCAGCTGAAAGAGATCCTGGCTCGCAACTTCGTCAACTA
CAAAGGCTGTTGTGAGAAGTGGGAGCTGATGGAGAGAGTGACTCGGCTGTACAAAGACCAGAAAGGACTGCAGCACCTGG
TATGTGGTGCTGAAGACCAAAATGGGGGAGCAGTACCATCGGCTCTGGAGGAGAACCTGTGTAAGATCTGCATGGACTCA
CCCATTGACTGTGTTCTGCTGGAGTGTGGCCACATGGTAACCTGTACCAAGTGTGGCAAGCGCATGAATGAATGCCCCAT
CTGCCGGCAGTATGTGATCCGAGCTGTGCACGTCTTCCGGTCCTGA
ATGTGGGCAACCTGCTGCAACTGGTTCTGCCTGGATGGACAGCCTGAGGAGGTGCCAGCATCCCAGGGGGCCAGGACACA
AGCCTATTCCAACCCTGGGTACAGCTCCTTCCCTTCACCGACGGGCTCAGAACCAAGCTGCAAGTCCTGTGGGACCCACT
TCACCAACATGGCCAGGAAGCAGACCTGCTTGGACTGTAAGAAGAATTTCTGCCTGACCTGTTCGAACCAGGTGGGGAAT
GGGCCCCGCCTCTGCCTGCTCTGCCAACGGTTCCGAGCCACAGCCTTTCAGCGTGAGGAGCTCATGAAGATGAAGGTGAA
GGACCTGAGGGACTATCTCAGCCTCCATGACATTTCCACGGAGATGTGCCGGGAGAAGGAAGAGCTGGTGTTCTTGGTGC
TTGGCCAGCAGCCTGCAGTCCCACAGGAGGGCAGGACTCGTGCCTTGTCCCCGGACTCGCCCGAGCAGCAGGCCTTCCTG
AGCCAGCCGCACGCCAGCACAATACCTCCTACCTCGGCCAGCCTCCCACCCTCCCCTGCACAGGCCACCTCTGTTCCCCC
AGCCCAGGCGCAGGAACGCCAGCAGGCCAATGGCCATGTGTCTCAGGACCAAGAGGAGCCCGTCTGCCTGGAGGGCACAG
CCACAGCATCTGTTGAGGATGAGACCCAGTCTCTTGACTCAGAGGACAGCTTTGTCCCAGGCCGGAGGGCCTCTCTGTCT
GACTTGACCCACCTAGAGGACATTGAAGGCCTGACCGTGCGGCAGCTGAAAGAGATCCTGGCTCGCAACTTCGTCAACTA
CAAAGGCTGTTGTGAGAAGTGGGAGCTGATGGAGAGAGTGACTCGGCTGTACAAAGACCAGAAAGGACTGCAGCACCTGG
TATGTGGTGCTGAAGACCAAAATGGGGGAGCAGTACCATCGGCTCTGGAGGAGAACCTGTGTAAGATCTGCATGGACTCA
CCCATTGACTGTGTTCTGCTGGAGTGTGGCCACATGGTAACCTGTACCAAGTGTGGCAAGCGCATGAATGAATGCCCCAT
CTGCCGGCAGTATGTGATCCGAGCTGTGCACGTCTTCCGGTCCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000001950 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000012628 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000024777 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000008923 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_385 | 87.67 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000011769 retrocopies