Parental gene:

SRM, ENSOPRG00000012079

Aliases:None
Description:spermidine synthase [Source:HGNC Symbol;Acc:11296]
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_55:29466..32401(-)


>ENSOPRG00000012079
ATGGAGCCCGGCCCCGACCGCCCCGCAGCCCCAGGCCCCGACGCCATCCGCGAGGGCTGGTTCCGCGAGACGTGCAGCCT
GTGGCCGGGCCAGGCCTTGTCACTGCAGGTGGAACAGCTGCTCCACCACCAGCGCTCGCGCTACCAGGACATCCTTGTCT
TCCGCAGTAAGACCTACGGCAATGGGTTGATGTTGCATGGCGTCATCCAGTGCACGGAGAGGGACGAGTTCTCCTACCAG
GAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGTCATTCACGTCTCTA
AGAAATTCCTGCCAGGGATGGCCGTTGGCTACTCCAGCCCAAAGCTGACCCTCCACGTGGGTGACGGCTTCGAGTTCATG
AAGCAAAACCAGGATGCCTTCGATGTCATCATCACCGACTCTTCGGATCCGATGGGCCCTGCTGAGAGCCTCTTCAAAGA
GTCCTACTACCAGCTCATGAAGACAGCACTCAAGGAGGATGGTGTACTCTGTTGCCAGGGGGAGTGCCAGTGGCTGCACT
TGGACCTAATCAAGCAGATGCGGCAGTTCTGCAAGGCACTCTTCCCTGTGGTGGGCTACGCCTATTGTACCATCCCCACC
TACCCTGGCGGGCAGATTGGCTTCATGCTGTGCAGCAAGAACCCGAGCACCAACTTCGCGGAGCCCGTGCAGCAGCTAAC
GCAGAAGCAGGTGGAGCAGATGCAGCTTAAGTACTACAACTCGGACGTACATCGCGCCGCCTTCGTGCTGCCCGAGTTTG
CCCGCAAGGCCCTGAATGACATCAGCTGA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002354 possible_ortholog 4 retrogenes
retro_cjac_2131, retro_cjac_2524, retro_cjac_3331, retro_cjac_4025,
Gorilla gorilla ENSGGOG00000014385 possible_ortholog 1 retrogene
retro_ggor_1756,
Loxodonta africana ENSLAFG00000028297 ortholog_one2one 2 retrogenes
retro_lafr_1175, retro_lafr_894,
Macropus eugenii ENSMEUG00000007002 ortholog_one2many 2 retrogenes
retro_meug_1330, retro_meug_887,
Myotis lucifugus ENSMLUG00000017585 possible_ortholog 1 retrogene
retro_mluc_2458,
Macaca mulatta ENSMMUG00000019321 possible_ortholog 2 retrogenes
retro_mmul_1500, retro_mmul_2259,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_1119 87.57 57.95
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Download FASTA sequences of all ENSOPRG00000012079 retrocopies