Parental gene: | TFAM, ENSPPYG00000002430 |
| Aliases: | None |
| Description: | transcription factor A, mitochondrial [Source:RefSeq peptide;Acc:NP_001124767] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 10:77480923..77492137(-) |
>ENSPPYG00000002430
ATGATAACACACGCCGTAGGGTCGCAAGCGGTTCCAGTTGTGATTGCTGGAGTTGTGTATTGCCAGGAGGCTCTCCGAGA
TTGGGGTCGGGTCACTGCCTCATCCGCCGGAGCGATGGCGTTTCTCCGAAGCATGTGGGGCGTGCTGAGTGCCCTGGGAA
GGTCTGGAGCAGAGCTGTGCACCGGCTGTGGAAGTCGACTGCGCTCCCCCTTCAGTTTTGTGTATTTACCGAGGTGGTTT
TCATCTGTCTTGGCAAGTTGTCCAAAGAAACCTATAAGTTCTTACCTTCGATTTTCTAAAGAACAACTACCCATATTTAA
AGCTCAGAACCCAGATGCAAAAACTACGGAACTAATTAGAAGAATTGCCCAGCGTTGGAGGGAACTTCCTGATTCAAAGA
AAAAAATATATCAAGATGCTTATAGGGCAGAGTGGCAGGTATATAAAGAAGAGATAAGCAGATTTAAAGAACAGCTAACT
CCAAGTCAGATTATGTCTTTGGAAAAAGAAATCACGGACAAACATTTAAAAAGGAAAGCTATGGCAAAAAAAAAAGAGTT
AACACTGCTTGGAAAACCAAAAAGACCTCGTTCAGCTTATAACGTTTATGTAGCTGAAAGATTCCAAGAAGTTCAGGGTG
ATTCACCACAGGAAAAGCTGAAGACTCTAAAGGAAAACTGGAAAAATCTGTCTGACTCTGAAAAGGAATTATATATTCAG
TATGCTAAAGAGGATGAAACTCGTTATCATAATGAAATGAAGTCTTGGGAAGAACAAATGATTGAAGTTGGACGAAAGGA
TCTTCTACGTCGCACAATGAAGCAACGACGAAAATATGGTGCTGAGGAGTGTTAA
ATGATAACACACGCCGTAGGGTCGCAAGCGGTTCCAGTTGTGATTGCTGGAGTTGTGTATTGCCAGGAGGCTCTCCGAGA
TTGGGGTCGGGTCACTGCCTCATCCGCCGGAGCGATGGCGTTTCTCCGAAGCATGTGGGGCGTGCTGAGTGCCCTGGGAA
GGTCTGGAGCAGAGCTGTGCACCGGCTGTGGAAGTCGACTGCGCTCCCCCTTCAGTTTTGTGTATTTACCGAGGTGGTTT
TCATCTGTCTTGGCAAGTTGTCCAAAGAAACCTATAAGTTCTTACCTTCGATTTTCTAAAGAACAACTACCCATATTTAA
AGCTCAGAACCCAGATGCAAAAACTACGGAACTAATTAGAAGAATTGCCCAGCGTTGGAGGGAACTTCCTGATTCAAAGA
AAAAAATATATCAAGATGCTTATAGGGCAGAGTGGCAGGTATATAAAGAAGAGATAAGCAGATTTAAAGAACAGCTAACT
CCAAGTCAGATTATGTCTTTGGAAAAAGAAATCACGGACAAACATTTAAAAAGGAAAGCTATGGCAAAAAAAAAAGAGTT
AACACTGCTTGGAAAACCAAAAAGACCTCGTTCAGCTTATAACGTTTATGTAGCTGAAAGATTCCAAGAAGTTCAGGGTG
ATTCACCACAGGAAAAGCTGAAGACTCTAAAGGAAAACTGGAAAAATCTGTCTGACTCTGAAAAGGAATTATATATTCAG
TATGCTAAAGAGGATGAAACTCGTTATCATAATGAAATGAAGTCTTGGGAAGAACAAATGATTGAAGTTGGACGAAAGGA
TCTTCTACGTCGCACAATGAAGCAACGACGAAAATATGGTGCTGAGGAGTGTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 5 .42 RPM |
| SRP007412_cerebellum | 7 .42 RPM |
| SRP007412_heart | 5 .69 RPM |
| SRP007412_kidney | 6 .73 RPM |
| SRP007412_liver | 5 .42 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000000535 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000014013 | ortholog_one2one | 2 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000006119 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000108064 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000004948 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000012891 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000008802 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000019829 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012295 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000014405 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000002519 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000000613 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009246 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_796 | 65.85 | 56.69 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_3042 | 70.55 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000002430 retrocopies