RetrogeneDB ID: | retro_ttru_1763 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_90781:98256..98640(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TFAM | ||
Ensembl ID: | ENSTTRG00000009246 | ||
Aliases: | None | ||
Description: | transcription factor A, mitochondrial [Source:HGNC Symbol;Acc:11741] |
Percent Identity: | 79.69 % |
Parental protein coverage: | 52.89 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | WGVLSALGKSGADLCAGCGSRLRSPLSFANVRRWFSSNFIGYPKKPMTSYVRFSKEQLPIFKAQNPDAKN |
WGVLSALGK.GA.LC.GCG.RLRS..SFANV...FS.N..GYPKKPMTSY.RFSK.QLPIFKAQNPDAKN | |
Retrocopy | WGVLSALGKPGAELCEGCGRRLRSLFSFANVPSCFSANVSGYPKKPMTSYIRFSKQQLPIFKAQNPDAKN |
Parental | SELIKKIAELWRELPDAEKKMYEDAYRTDWQAYKEEINRIKEQLTPSQLVSLEKEIMQ |
SELI.KIAEL.RE.PD.E.KMY.D.YR..WQAYKEEINRI.EQL.PSQ.VSLEKEIMQ | |
Retrocopy | SELILKIAELRREHPDSEEKMYKDVYRAEWQAYKEEINRIQEQLPPSQMVSLEKEIMQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dasypus novemcinctus | ENSDNOG00000000535 | 1 retrocopy | |
Dipodomys ordii | ENSDORG00000014013 | 2 retrocopies | |
Erinaceus europaeus | ENSEEUG00000006119 | 3 retrocopies | |
Homo sapiens | ENSG00000108064 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000004948 | 2 retrocopies | |
Loxodonta africana | ENSLAFG00000012891 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000008802 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000019829 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000012295 | 2 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000014405 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000002430 | 2 retrocopies | |
Pan troglodytes | ENSPTRG00000002519 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000000613 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000009246 | 1 retrocopy |
retro_ttru_1763 ,
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