Parental gene:

Tfam, ENSRNOG00000000613

Aliases:Tfam, Mttfa
Description:Transcription factor A, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q91ZW1]
Organism:Rat (Rattus norvegicus)
Coordinates:20:20760386..20772300(+)


>ENSRNOG00000000613
ATGGCGCTGTTCCGGGGAATGTGGGGCGTGCTAAGAACACTGGGGCGCACGGGGGTCGAGATGTGCGCGGGCTGCGGGGG
CCGCATACCCTCGCCTGTCAGCCTTATCTGTATTCCGAAGTGTTTTTCCAGCTTGGGTAATTATCCAAAGAAACCTATGA
GTTCATACCTTCGATTTTCTACAGAACAGCTACCCAAATTTAAAGCTAAACACCCAGATGCAAAAGTTTCAGAACTGATT
AGAAAAATTGCAGCCATGTGGAGGGAGCTTCCGGAAGCAGAAAAAAAGGTGTATGAAGCGGATTTTAAAGCTGAGTGGAA
GGTGTACAAAGAAGCTGTGAGCAAGTATAAAGAGCAGCTAACTCCAAGTCAGCTGATGGGCTTAGAGAAGGAAGCCCGGC
AGAAACGCCTAAAGAAGAAAGCACAAATCAAGAGGAGAGAATTAATTTTGCTTGGAAAACCAAAAAGACCTCGGTCAGCA
TATAACATTTACGTATCTGAAAGCTTCCAGGAGGCTAAGGATGAGTCAGCTCAGGGGAAATTGAAGCTTGTAAATCAGGC
TTGGAAAAATCTGTCTCATGATGAAAAGCAGGCATATATTCAGCTTGCTAAAGATGATAGAATTCGTTATGACAATGAAA
TGAAGTCTTGGGAAGAGCAAATGGCTGAAGTTGGGCGAAGTGATCTCATCCGTCGCAGTGTGAAGCGACCCCCGGGAGAC
ATCTCTGAGAATTAA

Library Parental gene expression (RPM)
SRP017611_brain 16 .75 RPM
SRP017611_kidney 34 .54 RPM
SRP017611_liver 20 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000000535 ortholog_one2one 1 retrogene
retro_dnov_536,
Dipodomys ordii ENSDORG00000014013 ortholog_one2one 2 retrogenes
retro_dord_415, retro_dord_691,
Erinaceus europaeus ENSEEUG00000006119 ortholog_one2one 3 retrogenes
retro_eeur_103, retro_eeur_182, retro_eeur_652,
Homo sapiens ENSG00000108064 ortholog_one2one 2 retrogenes
retro_hsap_3692, retro_hsap_923,
Gorilla gorilla ENSGGOG00000004948 ortholog_one2one 2 retrogenes
retro_ggor_2496, retro_ggor_745,
Loxodonta africana ENSLAFG00000012891 ortholog_one2one 1 retrogene
retro_lafr_1164,
Macropus eugenii ENSMEUG00000008802 ortholog_one2one 1 retrogene
retro_meug_190,
Macaca mulatta ENSMMUG00000019829 ortholog_one2one 1 retrogene
retro_mmul_1121,
Nomascus leucogenys ENSNLEG00000012295 ortholog_one2one 2 retrogenes
retro_nleu_2827, retro_nleu_288,
Oryctolagus cuniculus ENSOCUG00000014405 ortholog_one2one 1 retrogene
retro_ocun_1278,
Pongo abelii ENSPPYG00000002430 ortholog_one2one 2 retrogenes
retro_pabe_3042, retro_pabe_796,
Pan troglodytes ENSPTRG00000002519 ortholog_one2one 1 retrogene
retro_ptro_641,
Tursiops truncatus ENSTTRG00000009246 ortholog_one2one 1 retrogene
retro_ttru_1763,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1936 54.36 58.61
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Download FASTA sequences of all ENSRNOG00000000613 retrocopies