Parental gene:

ATP5B, ENSPPYG00000004668

Aliases:None
Description:ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide [Source:HGNC Symbol;Acc:830]
Organism:Orangutan (Pongo abelii)
Coordinates:12:56418536..56426236(-)


>ENSPPYG00000004668
TCCGCTGCTTCGGCCTCCGGGGCCTTGAGAGAACTCACCCCTTCAGCGTCGCTGCCCCCAGGTCAGCTCTTACTGCGGGC
CGCTCCGACGGTGGTCCATCCTGTCAGGGACTTATGGCGGTGGCAAACATCTCCTTCGCCAAAAGCAGGCGCCCCACCGG
GCGGCATCGTGGCTGTCATTGGCGCAGTGGTGGACGTCCAGTTTGATGAGGGGCTACCACCCTTCTTAAATGCCCTGGAA
GTGCAAGGCAGGGAGACCAGACTGGTTTTGGAGGTGGCCCAGCATTTGGGTGAGAGCACAGTAAGGACTATTGCTATGGA
TGGTACAGAAGGCTTGGTTAGAGGCCAGAAAGTACTGGATTCTGGTGCACCAATCAAAATTCCTGTTGGTCCTGAGACTT
TGGGCAGAATCATGAATGTCATTGGAGAACCTATTGATGAAAGAGGTCCCATCAAAACCAAACAATTTGCTTCCCATTCA
ATGCTGAGGGCTCCAGAGTTCATGGAAATGAGTGTTGAGCAGGAATTTCTGGTGACTGGTATCAAGGTTGTGGATCTGCT
AGCTCCCTATGCCAAGGGTGGCAAAATAGGGCTTTTTGGTGGTGCTGGAGTTGGCAAGACTGTACTGATCATGGAGTTAA
TCAACAATGTCGCCAAAGCCCATGGTGGTTACTCTGTGTTTGCTGGTGTTGGTGAGAGGACCCGTGAAGGCAATGATTTA
TACCATGAAATGATTGAATCTGGTGTTATCAACTTAAAAGATGCCACCTCTAAGGTAGCGCTGGTATATGGTCAAATGAA
TGAACCACCTGGTGCTCGTGCCCGGGTAGCTCTGACTGGACTGACTGTGGCTGAATACTTCAGAGACCAAGAAGGTCAAG
ATGTACTGCTATTTATTGATAACATCTTTCGCTTCACCCAGGCTGGTTCAGAGGTGTCTGCATTATTGGGCCGAATCCCT
TCTGCTGTGGGCTATCAGCCTACCCTGGCCACTGACATGGGTACTATGATGGAAAGAATTACCACTACCAAGAAGGGATC
TATCACCTCTGTACAGGCTATCTATGTGCCTGCTGATGACTTGACTGACCCTGCCCCTGCTACTACGTTTGCCCATTTGG
ATGCTACCACTGTACTGTCGCGTGCCATTGCTGAGCTGGGCATCTATCCAGCTGTGGATCCTCTAGACTCCACCTCTCGT
ATCATGGATCCCAACATTGTTGGCAGTGAGCATTACGATGTTGCCCGTGGGGTGCAAAAGATCCTGCAGGACTACAAATC
CCTCCAAGATATCATTGCCATCCTGGGTATGGATGAACTTTCTGAGGAAGACAAGTTGACCGTGTCCCGTGCACGGAAAA
TACAGCGTTTCTTGTCTCAGCCATTCCAGGTTGCTGAGGTCTTCACAGGTCATATGGGGAAGCTGGTACCCCTGAAGGAG
ACCATCAAAGGATTCCAGCAGATTTTGGCAGGTGAATATGACCATCTCCCAGAACAGGCCTTCTATATGGTGGGACCCAT
TGAAGAAGCTGTGGCAAAAGCTGATAAGCTGGCTGAAGAGCATTCATCG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 403 .12 RPM
SRP007412_cerebellum 461 .35 RPM
SRP007412_heart 662 .82 RPM
SRP007412_kidney 553 .48 RPM
SRP007412_liver 300 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000016752 ortholog_one2one 1 retrogene
retro_acar_181,
Bos taurus ENSBTAG00000013315 ortholog_one2one 1 retrogene
retro_btau_1264,
Choloepus hoffmanni ENSCHOG00000005350 ortholog_one2one 1 retrogene
retro_chof_1544,
Callithrix jacchus ENSCJAG00000033571 ortholog_one2one 2 retrogenes
retro_cjac_1488, retro_cjac_928,
Dasypus novemcinctus ENSDNOG00000011289 ortholog_one2one 1 retrogene
retro_dnov_361,
Echinops telfairi ENSETEG00000010208 ortholog_one2many 1 retrogene
retro_etel_2162,
Homo sapiens ENSG00000110955 ortholog_one2one 1 retrogene
retro_hsap_2128,
Gorilla gorilla ENSGGOG00000011596 ortholog_one2one 1 retrogene
retro_ggor_1648,
Macropus eugenii ENSMEUG00000002875 ortholog_one2one 6 retrogenes
retro_meug_1416, retro_meug_1608, retro_meug_411, retro_meug_430, retro_meug_685, retro_meug_908,
Microcebus murinus ENSMICG00000001084 ortholog_one2one 1 retrogene
retro_mmur_495,
Macaca mulatta ENSMMUG00000001027 ortholog_one2many 1 retrogene
retro_mmul_103,
Pan troglodytes ENSPTRG00000005107 ortholog_one2one 1 retrogene
retro_ptro_1557,
Sus scrofa ENSSSCG00000000405 ortholog_one2one 1 retrogene
retro_sscr_453,
Tursiops truncatus ENSTTRG00000002144 ortholog_one2one 1 retrogene
retro_ttru_371,
Vicugna pacos ENSVPAG00000004025 ortholog_one2one 2 retrogenes
retro_vpac_405, retro_vpac_562,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1921 68.70 64.44
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2. retro_pabe_2032 69.59 68.45
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Download FASTA sequences of all ENSPPYG00000004668 retrocopies