Parental gene: | PSMD14, ENSPPYG00000012881 |
| Aliases: | None |
| Description: | proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 [Source:HGNC Symbol;Acc:16889] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 2b:51097867..51201761(+) |
>ENSPPYG00000012881
ATGGACAGACTTCTTAGACTTGGAGGAGGTATGCCTGGACTGGGCCAGGGGCCACCTACAGATGCTCCTGCAGTGGACAC
AGCAGAACAAGTCTATATCTCTTCCCTGGCACTGTTAAAAATGTTAAAACATGGCCGTGCTGGAGTTCCAATGGAAGTTA
TGGGTTTGATGCTTGGAGAATTTGTTGATGATTATACCGTCAGAGTGATTGATGTGTTTGCTATGCCACAGTCAGGAACA
GGTGTCAGTGTGGAGGCAGTTGATCCAGTGTTCCAAGCTAAAATGTTGGATATGTTGAAGCAGACAGGAAGGCCGGAGAT
GGTTGTTGGTTGGTATCACAGTCACCCTGGCTTTGGTTGTTGGCTTTCTGGTGTGGATATCAACACTCAGCAGAGCTTTG
AAGCCTTGTCGGAGAGAGCTGTGGCAGTGGTTGTGGATCCCATTCAGAGTGTAAAAGGAAAGGTTGTTATTGATGCCTTC
AGATTGATCAATGCTAATATGATGGTCTTAGGACATGAACCAAGACAAACAACTTCGAATCTGGGTCACTTAAACAAGCC
ATCTATCCAGGCATTAATTCATGGACTAAACAGACATTATTACTCCATTACTATTAACTATCGGAAAAATGAACTGGAAC
AGAAGATGTTGCTAAATTTGCATAAGAAGAGTTGGATGGAAGGTTTAACACTTCAGGACTACAGTGAACATTGTAAACAC
AATGAATCAGTGGTAAAAGAGATGTTGGAATTAGCCAAGAATTACAATAAGGCTGTAGAAGAAGAAGATAAGATGACACC
TGAACAGCTGGCAATAAAGAATGTTGGCAAGCAGGACCCCAAACGTCATTTGGAGGAACATGTGGATGTACTTATGACCT
CAAATATTGTCCAGTGTTTAGCAGCTATGTTGGATACTGTCGTATTTAAATAA
ATGGACAGACTTCTTAGACTTGGAGGAGGTATGCCTGGACTGGGCCAGGGGCCACCTACAGATGCTCCTGCAGTGGACAC
AGCAGAACAAGTCTATATCTCTTCCCTGGCACTGTTAAAAATGTTAAAACATGGCCGTGCTGGAGTTCCAATGGAAGTTA
TGGGTTTGATGCTTGGAGAATTTGTTGATGATTATACCGTCAGAGTGATTGATGTGTTTGCTATGCCACAGTCAGGAACA
GGTGTCAGTGTGGAGGCAGTTGATCCAGTGTTCCAAGCTAAAATGTTGGATATGTTGAAGCAGACAGGAAGGCCGGAGAT
GGTTGTTGGTTGGTATCACAGTCACCCTGGCTTTGGTTGTTGGCTTTCTGGTGTGGATATCAACACTCAGCAGAGCTTTG
AAGCCTTGTCGGAGAGAGCTGTGGCAGTGGTTGTGGATCCCATTCAGAGTGTAAAAGGAAAGGTTGTTATTGATGCCTTC
AGATTGATCAATGCTAATATGATGGTCTTAGGACATGAACCAAGACAAACAACTTCGAATCTGGGTCACTTAAACAAGCC
ATCTATCCAGGCATTAATTCATGGACTAAACAGACATTATTACTCCATTACTATTAACTATCGGAAAAATGAACTGGAAC
AGAAGATGTTGCTAAATTTGCATAAGAAGAGTTGGATGGAAGGTTTAACACTTCAGGACTACAGTGAACATTGTAAACAC
AATGAATCAGTGGTAAAAGAGATGTTGGAATTAGCCAAGAATTACAATAAGGCTGTAGAAGAAGAAGATAAGATGACACC
TGAACAGCTGGCAATAAAGAATGTTGGCAAGCAGGACCCCAAACGTCATTTGGAGGAACATGTGGATGTACTTATGACCT
CAAATATTGTCCAGTGTTTAGCAGCTATGTTGGATACTGTCGTATTTAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 31 .52 RPM |
| SRP007412_cerebellum | 30 .40 RPM |
| SRP007412_heart | 15 .32 RPM |
| SRP007412_kidney | 26 .29 RPM |
| SRP007412_liver | 23 .84 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000002556 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000005572 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015747 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000026914 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004933 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000012575 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000004911 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000014118 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2100 | 72.31 | 62.58 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000012881 retrocopies