Parental gene: | EIF5A2, ENSPPYG00000014294 |
| Aliases: | None |
| Description: | Eukaryotic translation initiation factor 5A-2 [Source:UniProtKB/Swiss-Prot;Acc:Q5R898] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 3:174468624..174485280(-) |
>ENSPPYG00000014294
ATGGCAGACGAAATTGATTTCACTACTGGAGATGCCGGGGCTTCCAGCACTTACCCTATGCAGTGCTCGGCCTTGCGGAA
AAACGGCTTCGTGGTGCTCAAAGGACGACCATGCAAAATAGTGGAGATGTCAACTTCCAAAACTGGAAAGCATGGTCATG
CCAAGGTTCACCTTGTTGGAATTGATATTTTCACGGGCAAAAAATATGAAGATATTTGTCCTTCTACTCACAACATGGAT
GTTCCAAATATTAAGAGAAATGATTATCAACTGATATGCATTCAAGATGGTTACCTTTCCCTGCTGACAGAAACTGGTGA
AGTTCGTGAAGATCTTAAACTGCCAGAAGGTGAACTAGGCAAAGAAATAGAAGGAAAATACAATGCAGGTGAAGATGTAC
AGGTATCTGTCATGTGTGCAATGAGTGAAGAATATGCTGTAGCCATAAAACCCTGCAAATAA
ATGGCAGACGAAATTGATTTCACTACTGGAGATGCCGGGGCTTCCAGCACTTACCCTATGCAGTGCTCGGCCTTGCGGAA
AAACGGCTTCGTGGTGCTCAAAGGACGACCATGCAAAATAGTGGAGATGTCAACTTCCAAAACTGGAAAGCATGGTCATG
CCAAGGTTCACCTTGTTGGAATTGATATTTTCACGGGCAAAAAATATGAAGATATTTGTCCTTCTACTCACAACATGGAT
GTTCCAAATATTAAGAGAAATGATTATCAACTGATATGCATTCAAGATGGTTACCTTTCCCTGCTGACAGAAACTGGTGA
AGTTCGTGAAGATCTTAAACTGCCAGAAGGTGAACTAGGCAAAGAAATAGAAGGAAAATACAATGCAGGTGAAGATGTAC
AGGTATCTGTCATGTGTGCAATGAGTGAAGAATATGCTGTAGCCATAAAACCCTGCAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 2 .27 RPM |
| SRP007412_cerebellum | 1 .95 RPM |
| SRP007412_heart | 1 .54 RPM |
| SRP007412_kidney | 1 .76 RPM |
| SRP007412_liver | 0 .58 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000005363 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000012594 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000014801 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000163577 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000013225 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000007473 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005292 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000016657 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007907 | within_species_paralog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000015621 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000008130 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1308 | 84.52 | 54.90 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1640 | 64.52 | 98.04 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000014294 retrocopies