Parental gene:

EIF5A2, ENSPPYG00000014294

Aliases:None
Description:Eukaryotic translation initiation factor 5A-2 [Source:UniProtKB/Swiss-Prot;Acc:Q5R898]
Organism:Orangutan (Pongo abelii)
Coordinates:3:174468624..174485280(-)


>ENSPPYG00000014294
ATGGCAGACGAAATTGATTTCACTACTGGAGATGCCGGGGCTTCCAGCACTTACCCTATGCAGTGCTCGGCCTTGCGGAA
AAACGGCTTCGTGGTGCTCAAAGGACGACCATGCAAAATAGTGGAGATGTCAACTTCCAAAACTGGAAAGCATGGTCATG
CCAAGGTTCACCTTGTTGGAATTGATATTTTCACGGGCAAAAAATATGAAGATATTTGTCCTTCTACTCACAACATGGAT
GTTCCAAATATTAAGAGAAATGATTATCAACTGATATGCATTCAAGATGGTTACCTTTCCCTGCTGACAGAAACTGGTGA
AGTTCGTGAAGATCTTAAACTGCCAGAAGGTGAACTAGGCAAAGAAATAGAAGGAAAATACAATGCAGGTGAAGATGTAC
AGGTATCTGTCATGTGTGCAATGAGTGAAGAATATGCTGTAGCCATAAAACCCTGCAAATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 2 .27 RPM
SRP007412_cerebellum 1 .95 RPM
SRP007412_heart 1 .54 RPM
SRP007412_kidney 1 .76 RPM
SRP007412_liver 0 .58 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005363 ortholog_one2one 1 retrogene
retro_chof_1016,
Cavia porcellus ENSCPOG00000012594 ortholog_one2one 1 retrogene
retro_cpor_1060,
Dasypus novemcinctus ENSDNOG00000014801 ortholog_one2one 2 retrogenes
retro_dnov_1133, retro_dnov_268,
Homo sapiens ENSG00000163577 ortholog_one2one 1 retrogene
retro_hsap_1591,
Loxodonta africana ENSLAFG00000013225 ortholog_one2one 1 retrogene
retro_lafr_901,
Macropus eugenii ENSMEUG00000007473 ortholog_one2one 2 retrogenes
retro_meug_1619, retro_meug_641,
Nomascus leucogenys ENSNLEG00000005292 ortholog_one2one 1 retrogene
retro_nleu_1762,
Oryctolagus cuniculus ENSOCUG00000016657 ortholog_one2one 1 retrogene
retro_ocun_65,
Pongo abelii ENSPPYG00000007907 within_species_paralog 1 retrogene
retro_pabe_1468,
Pan troglodytes ENSPTRG00000015621 ortholog_one2one 1 retrogene
retro_ptro_1070,
Ictidomys tridecemlineatus ENSSTOG00000008130 ortholog_one2one 2 retrogenes
retro_itri_1400, retro_itri_689,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1308 84.52 54.90
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2. retro_pabe_1640 64.52 98.04
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Download FASTA sequences of all ENSPPYG00000014294 retrocopies