Parental gene:

EIF5A2, ENSCPOG00000012594

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_100:3337617..3347154(-)


>ENSCPOG00000012594
ATGGCGGACGAAATTGATTTCACTACTGGTGATGCTGGGGCTTCCAGCACTTACCCTATGCAGTGCTCTCTGCGCAAAAA
CGGCTTCGTGGTGCTCAAAGGACGACCATGCAAAATAGTGGAGATGTCAACTTCCAAAACTGGGAAGCATGGTCATGCCA
AAGTACACCTTGTTGGAATTGACATTTTCACAGGGAAAAAATATGAAGATATTTGCCCTTCTACTCACAACATGGATGTT
CCAAATATTAAAAGAAATGATTATCAACTAATATGCATTCAGGATGGTTATCTTTCCCTGCTGACAGAAACTGGTGAAGT
CCGTGAGGATCTTAAATTGCCAGAAGGTGAACTAGGCAAAGAAATAGAAGGAAAATATAATGCAGGTGAAGATGTACAGG
TGTCTGTCATGTGTGCAATGAGTGAAGAGTATGCTGTAGCCATAAAGCCTGCAAATAAATGA

Library Parental gene expression (RPM)
SRP017611_liver 2 .00 RPM
SRP017611_kidney 2 .83 RPM
SRP017611_brain 4 .95 RPM
SRP040447_lung 1 .21 RPM
SRP040447_skeletal_muscle 0 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005363 ortholog_one2one 1 retrogene
retro_chof_1016,
Dasypus novemcinctus ENSDNOG00000014801 ortholog_one2one 2 retrogenes
retro_dnov_1133, retro_dnov_268,
Homo sapiens ENSG00000163577 ortholog_one2one 1 retrogene
retro_hsap_1591,
Loxodonta africana ENSLAFG00000013225 ortholog_one2one 1 retrogene
retro_lafr_901,
Macropus eugenii ENSMEUG00000007473 ortholog_one2one 2 retrogenes
retro_meug_1619, retro_meug_641,
Macaca mulatta ENSMMUG00000022880 ortholog_one2one 1 retrogene
retro_mmul_2222,
Nomascus leucogenys ENSNLEG00000005292 ortholog_one2one 1 retrogene
retro_nleu_1762,
Oryctolagus cuniculus ENSOCUG00000016657 ortholog_one2many 1 retrogene
retro_ocun_65,
Pongo abelii ENSPPYG00000014294 ortholog_one2one 2 retrogenes
retro_pabe_1308, retro_pabe_1640,
Pan troglodytes ENSPTRG00000015621 ortholog_one2one 1 retrogene
retro_ptro_1070,
Ictidomys tridecemlineatus ENSSTOG00000008130 ortholog_one2one 2 retrogenes
retro_itri_1400, retro_itri_689,
Tupaia belangeri ENSTBEG00000000408 ortholog_one2one 2 retrogenes
retro_tbel_1442, retro_tbel_4419,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1060 67.46 81.05
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Download FASTA sequences of all ENSCPOG00000012594 retrocopies