Parental gene: | CDK5, ENSPPYG00000018183 |
| Aliases: | None |
| Description: | cyclin-dependent kinase 5 [Source:HGNC Symbol;Acc:1774] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 7:148735221..148742793(-) |
>ENSPPYG00000018183
ATGCAGAAATACGAGAAACTGGAAAAGATTGGGGAAGGCACCTACGGAACAGTGTTCAAGGCCAAAAACCGGGAGACTCA
TGAGATCGTGGCTCTGAAACGGGTGAGGCTGGATGACGATGATGAGGGTGTGCCGAGTTCCGCCCTCCGGGAGATCTGCC
TACTCAAGGAGCTGAAGCACAAGAACATCGTCAGGCTTCATGACGTCCTGCACAGCGACAAGAAGCTGACTTTGGTTTTT
GAATTCTGTGACCAGGACCTGAAGAAGTATTTTGACAGTTGCAATGGTGACCTCGATCCTGAGATTGTAAAGTCATTCCT
CTTCCAGCTACTAAAAGGCCTGGGATTCTGTCATAGCCGCAATGTGCTACACAGGGACCTGAAGCCCCAGAACCTGCTAA
TAAACAGGAACGGGGAGCTGAAATTGGCTGATTTCGGCCTGGCTCGAGCCTTTGGGATTCCCGTCCGCTGTTACTCAGCT
GAGGTGGTCACACTGTGGTACCGCCCACCGGATGTCCTCTTTGGGGCCAAGCTGTACTCCACGTCCATTGACATGTGGTC
AGCCGGCTGCATCTTTGCAGAGCTGGCCAATGCCGGGCGGCCTCTTTTTCCCGGCAATGATGTCGATGACCAGTTGAAGA
GGATCTTCCGGCTGCTGGGGACGCCCACCGAGGAGCAGTGGCCCTCTATGACCAAGCTGCCAGACTATAAGCCCTACCCG
ATGTACCCGGCCACAACATCCCTGGTGAACGTCGTGCCCAAACTCAATGCCACAGGGAGGGACCTGCTGCAGAACCTTCT
GAAGTGTAACCCTGTCCAGCGTATCTCAGCAGAAGAGGCCCTGCAGCACCCCTACTTCTCCGACTTCTGTCCGCCCTAG
ATGCAGAAATACGAGAAACTGGAAAAGATTGGGGAAGGCACCTACGGAACAGTGTTCAAGGCCAAAAACCGGGAGACTCA
TGAGATCGTGGCTCTGAAACGGGTGAGGCTGGATGACGATGATGAGGGTGTGCCGAGTTCCGCCCTCCGGGAGATCTGCC
TACTCAAGGAGCTGAAGCACAAGAACATCGTCAGGCTTCATGACGTCCTGCACAGCGACAAGAAGCTGACTTTGGTTTTT
GAATTCTGTGACCAGGACCTGAAGAAGTATTTTGACAGTTGCAATGGTGACCTCGATCCTGAGATTGTAAAGTCATTCCT
CTTCCAGCTACTAAAAGGCCTGGGATTCTGTCATAGCCGCAATGTGCTACACAGGGACCTGAAGCCCCAGAACCTGCTAA
TAAACAGGAACGGGGAGCTGAAATTGGCTGATTTCGGCCTGGCTCGAGCCTTTGGGATTCCCGTCCGCTGTTACTCAGCT
GAGGTGGTCACACTGTGGTACCGCCCACCGGATGTCCTCTTTGGGGCCAAGCTGTACTCCACGTCCATTGACATGTGGTC
AGCCGGCTGCATCTTTGCAGAGCTGGCCAATGCCGGGCGGCCTCTTTTTCCCGGCAATGATGTCGATGACCAGTTGAAGA
GGATCTTCCGGCTGCTGGGGACGCCCACCGAGGAGCAGTGGCCCTCTATGACCAAGCTGCCAGACTATAAGCCCTACCCG
ATGTACCCGGCCACAACATCCCTGGTGAACGTCGTGCCCAAACTCAATGCCACAGGGAGGGACCTGCTGCAGAACCTTCT
GAAGTGTAACCCTGTCCAGCGTATCTCAGCAGAAGAGGCCCTGCAGCACCCCTACTTCTCCGACTTCTGTCCGCCCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 48 .66 RPM |
| SRP007412_cerebellum | 16 .54 RPM |
| SRP007412_heart | 1 .38 RPM |
| SRP007412_kidney | 8 .29 RPM |
| SRP007412_liver | 4 .38 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000020258 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000164885 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000016879 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004100 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000019872 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000016068 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3290 | 90.07 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000018183 retrocopies