Parental gene:

CDK5, ENSPTRG00000019872

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:7:152214129..152218287(-)


>ENSPTRG00000019872
ATGCAGAAATACGAGAAACTGGAAAAGATTGGGGAAGGCACCTACGGAACTGTGTTCAAGGCCAAAAACCGGGAGACTCA
TGAGATCGTGGCTCTGAAACGGGTGAGGCTGGATGACGATGATGAGGGTGTGCCGAGTTCAGCCCTCCGGGAGATCTGCC
TACTCAAGGAGCTGAAGCACAAGAACATCGTCAGGCTTCATGATGTCCTGCACAGCGACAAGAAGCTGACTTTGGTTTTT
GAATTCTGTGACCAGGACCTGAAGAAGTATTTTGACAGTTGCAATGGTGACCTCGATCCTGAGATTGTAAAGTCATTCCT
CTTCCAGCTACTAAAAGGGCTGGGATTCTGTCATAGCCGCAATGTGCTACACAGGGACCTGAAGCCCCAGAACCTGCTAA
TAAACAGGAATGGGGAGCTGAAATTGGCTGATTTTGGCCTGGCTCGAGCCTTTGGGATTCCCGTCCGCTGTTACTCAGCT
GAGGTGGTCACACTGTGGTACCGCCCACCGGATGTCCTCTTTGGGGCCAAGCTGTACTCCACGTCCATCGACATGTGGTC
AGCCGGCTGCATCTTTGCAGAGCTGGCCAATGCTGGGCGGCCTCTTTTTCCCGGCAATGATGTCGATGACCAGTTGAAGA
GGATCTTCCGACTGCTGGGGACGCCCACCGAGGAGCAGTGGCCCTCTATGACCAAGCTGCCAGACTATAAGCCCTATCCG
ATGTACCCGGCCACAACATCCCTGGTGAACGTCGTGCCCAAACTCAATGCCACAGGGAGGGACCTGCTGCAGAACCTTCT
GAAGTGTAACCCTGTCCAGCGTATCTCAGCAGAAGAGGCCCTGCAGCACCCCTACTTCTCCGACTTCTGTCCGCCCTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 51 .10 RPM
SRP007412_cerebellum 22 .62 RPM
SRP007412_heart 3 .15 RPM
SRP007412_kidney 13 .63 RPM
SRP007412_liver 7 .14 RPM
SRP007412_testis 1 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000020258 ortholog_one2one 1 retrogene
retro_cjac_1522,
Homo sapiens ENSG00000164885 ortholog_one2one 1 retrogene
retro_hsap_4002,
Gorilla gorilla ENSGGOG00000016879 ortholog_one2one 1 retrogene
retro_ggor_2686,
Nomascus leucogenys ENSNLEG00000004100 ortholog_one2one 1 retrogene
retro_nleu_549,
Pongo abelii ENSPPYG00000018183 ortholog_one2one 1 retrogene
retro_pabe_3290,
Pan troglodytes ENSPTRG00000005147 other_paralog 1 retrogene
retro_ptro_180,
Ictidomys tridecemlineatus ENSSTOG00000016068 ortholog_one2one 1 retrogene
retro_itri_906,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2717 90.75 100.00
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Download FASTA sequences of all ENSPTRG00000019872 retrocopies