Parental gene: | VPS37A, ENSPPYG00000018386 |
| Aliases: | None |
| Description: | vacuolar protein sorting 37 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:24928] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 8:16607889..16648406(+) |
>ENSPPYG00000018386
ATGAGCTGGCTCTTTCCCCTGACCAAGAGCGCCTCCTCCTCCGCGGCTGGGTCCCCCGGTGGCCTCACCAGCCTCCAGCA
GCAGAAGCAGCGCCTGATCGAGTCCCTCCGGAACTCACACTCCAGTATAGCCGAAATACAGAAAGATGTGGAATACAGAT
TGCCATTCACCATAAACAACCTGACAATTAACATTAATATATTGCTTCCTCCACAGTTTCCTCAGGAAAAACCAGTGATC
AGTGTTTATCCACCAATACGACATCACTTAATGGATAAACAAGGAGTGTATGTTACCTCTCCATTAGTAAACAATTTTAC
AATGCACTCAGATCTTGGAAAAATTATTCAGAGTCTGTTGGATGAGTTTTGGAAGAATCCTCCGGTTTTAGCTCCTACTT
CAACAGCATTTCCTTATCTATACAGTAACCCAAGTGGGATGTCTCCTTATGCTTCTCAGGGTTTTCCATTTCTTCCTCCA
TATCCTCCACAAGAAGCAAACAGGAGTATCACTTCTTTATCTGTTGCTGACACTGTTTCTTCTTCAACAACAAGTCATAC
CACAGCTAAGCCTGCCGCTCCTTCATTTGGTGTCCTTTCAAATCTGCCATTACCCATTCCCACAATGGATGCTTCAATAC
CGACAAGCCAAAATGGTTTTGGTTACAAGATGCCAGATGTCCCTGATGCATTTCCAGAACTCTCAGAACTAAGTGTGTCA
CAACTCACAGATATGAATGAACAAGAGGAGGTATTACTAGAACAGTTTCTGACTTTGCCTCAACTAAAACAAATTATTAC
CGACAAAGATGACTTAGTAAAAAGTATTGAGGAACTAGCAAGAAAAAATCTCCTTTTGGAACCCAGCTTGGAAGCCAAAA
GGCAAACTGTTTTAGATAAGTATGAATTACTTACACAGATGAAGTCTACTTTTGAAAAGAAGATGCAAAGGCAGCATGAA
CTTAGTGAGAGCTGTAGTGCAAGTGCCCTTCAGGCAAGATTGAAAGTAGCTGCACATGAAGCTGAGGAAGAATCTGATAA
TATTGCAGAAGACTTCTTGGAGGGAAAGATGGAAATAGATGATTTTCTCAGTAGCTTCATGGAAAAGAGAACAATTTGCC
ACTGTAGAAGAGCCAAGGAAGAGAAACTTCAGCAGGCAATAGCAATGCACAGCCAATTTCATGCTCCACTATAG
ATGAGCTGGCTCTTTCCCCTGACCAAGAGCGCCTCCTCCTCCGCGGCTGGGTCCCCCGGTGGCCTCACCAGCCTCCAGCA
GCAGAAGCAGCGCCTGATCGAGTCCCTCCGGAACTCACACTCCAGTATAGCCGAAATACAGAAAGATGTGGAATACAGAT
TGCCATTCACCATAAACAACCTGACAATTAACATTAATATATTGCTTCCTCCACAGTTTCCTCAGGAAAAACCAGTGATC
AGTGTTTATCCACCAATACGACATCACTTAATGGATAAACAAGGAGTGTATGTTACCTCTCCATTAGTAAACAATTTTAC
AATGCACTCAGATCTTGGAAAAATTATTCAGAGTCTGTTGGATGAGTTTTGGAAGAATCCTCCGGTTTTAGCTCCTACTT
CAACAGCATTTCCTTATCTATACAGTAACCCAAGTGGGATGTCTCCTTATGCTTCTCAGGGTTTTCCATTTCTTCCTCCA
TATCCTCCACAAGAAGCAAACAGGAGTATCACTTCTTTATCTGTTGCTGACACTGTTTCTTCTTCAACAACAAGTCATAC
CACAGCTAAGCCTGCCGCTCCTTCATTTGGTGTCCTTTCAAATCTGCCATTACCCATTCCCACAATGGATGCTTCAATAC
CGACAAGCCAAAATGGTTTTGGTTACAAGATGCCAGATGTCCCTGATGCATTTCCAGAACTCTCAGAACTAAGTGTGTCA
CAACTCACAGATATGAATGAACAAGAGGAGGTATTACTAGAACAGTTTCTGACTTTGCCTCAACTAAAACAAATTATTAC
CGACAAAGATGACTTAGTAAAAAGTATTGAGGAACTAGCAAGAAAAAATCTCCTTTTGGAACCCAGCTTGGAAGCCAAAA
GGCAAACTGTTTTAGATAAGTATGAATTACTTACACAGATGAAGTCTACTTTTGAAAAGAAGATGCAAAGGCAGCATGAA
CTTAGTGAGAGCTGTAGTGCAAGTGCCCTTCAGGCAAGATTGAAAGTAGCTGCACATGAAGCTGAGGAAGAATCTGATAA
TATTGCAGAAGACTTCTTGGAGGGAAAGATGGAAATAGATGATTTTCTCAGTAGCTTCATGGAAAAGAGAACAATTTGCC
ACTGTAGAAGAGCCAAGGAAGAGAAACTTCAGCAGGCAATAGCAATGCACAGCCAATTTCATGCTCCACTATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 4 .70 RPM |
| SRP007412_cerebellum | 11 .67 RPM |
| SRP007412_heart | 5 .15 RPM |
| SRP007412_kidney | 3 .85 RPM |
| SRP007412_liver | 7 .62 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000682 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000011769 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000014879 | ortholog_one2one | 9 retrogenes | |
| Homo sapiens | ENSG00000155975 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000011650 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002558 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000020019 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2699 | 88.13 | 84.13 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2821 | 88.69 | 55.42 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000018386 retrocopies