Parental gene: | AARSD1, ENSPPYG00000029909 |
| Aliases: | None |
| Description: | alanyl-tRNA synthetase domain containing 1 [Source:HGNC Symbol;Acc:28417] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 17:46461773..46468408(+) |
>ENSPPYG00000029909
ATGACTGCAGAGCAAGTAGCTGCCATTGAGCAGAGCGTCAATGAAAAAATCAGAGATCGGCTGCCTGTGAATGTCCGAGA
ACTGAGCCTGGATGATCCTGAGGTGGAGCAGGTGAGAGGCCGGGGTTTGCCGGATGATCATGCTGGGCCCATTCGGGTTG
TTAGCATCAAGGGCGTTGATTCCAACATGTGCTGTGGGACCCATGTGAGCAATCTCAGTGACCTTCAGGTCATTAAGATT
CTGGGCACTGAGAAGGGGAAAAAGAACAAAACCAACCTGATATTTCTGGCTGGGAACCGGGTGCTGAAGTGGATGGAGAG
AAGTCATGGAACTGAAAAAGCACTGACTGCTCTGCTTAAGTGTGGAGCAGAGGATCACGTGGAAGCAGTGAAAAAGCTCC
AGAACTCTACCAAGATCCTGCAGAAGAATAACCTGAATCTGCTCAGAGACCTGGCTGTGCACATTGCCCGTCGCCTCAGG
AACAGTCCAGATTGGGGAGGTGTGGTCGTATTACACAGGAAGGAGGGTGATTCAGAGTTCATGAATATCATTGCCAATGA
GATTGGGTCAGAGGAGACCCTCCTGTTCTTAACTGTGGGCGATGAGAAAGGTGCTGGACTCTTCTTACTGGCAGGGCCAC
CTGCGTCTGTGGAGACCCTGGGGCCTAGGGTGGCTGAGGTCCTGGAAGGCAAAGGAGCAGGGAAGAAAGGCCGTTTTCAG
GGCAAGGCCACCAAGATGAGCCGGCGGATGGAGGCGCAGGCGCTTCTCCAGGACTACATCAGCATTCAGAGTGCTAAGGA
GTGA
ATGACTGCAGAGCAAGTAGCTGCCATTGAGCAGAGCGTCAATGAAAAAATCAGAGATCGGCTGCCTGTGAATGTCCGAGA
ACTGAGCCTGGATGATCCTGAGGTGGAGCAGGTGAGAGGCCGGGGTTTGCCGGATGATCATGCTGGGCCCATTCGGGTTG
TTAGCATCAAGGGCGTTGATTCCAACATGTGCTGTGGGACCCATGTGAGCAATCTCAGTGACCTTCAGGTCATTAAGATT
CTGGGCACTGAGAAGGGGAAAAAGAACAAAACCAACCTGATATTTCTGGCTGGGAACCGGGTGCTGAAGTGGATGGAGAG
AAGTCATGGAACTGAAAAAGCACTGACTGCTCTGCTTAAGTGTGGAGCAGAGGATCACGTGGAAGCAGTGAAAAAGCTCC
AGAACTCTACCAAGATCCTGCAGAAGAATAACCTGAATCTGCTCAGAGACCTGGCTGTGCACATTGCCCGTCGCCTCAGG
AACAGTCCAGATTGGGGAGGTGTGGTCGTATTACACAGGAAGGAGGGTGATTCAGAGTTCATGAATATCATTGCCAATGA
GATTGGGTCAGAGGAGACCCTCCTGTTCTTAACTGTGGGCGATGAGAAAGGTGCTGGACTCTTCTTACTGGCAGGGCCAC
CTGCGTCTGTGGAGACCCTGGGGCCTAGGGTGGCTGAGGTCCTGGAAGGCAAAGGAGCAGGGAAGAAAGGCCGTTTTCAG
GGCAAGGCCACCAAGATGAGCCGGCGGATGGAGGCGCAGGCGCTTCTCCAGGACTACATCAGCATTCAGAGTGCTAAGGA
GTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 27 .98 RPM |
| SRP007412_cerebellum | 18 .48 RPM |
| SRP007412_heart | 11 .05 RPM |
| SRP007412_kidney | 17 .67 RPM |
| SRP007412_liver | 14 .41 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000266967 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004669 | within_species_paralog | 4 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000000481 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_458 | 87.63 | 72.66 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_3654 | 69.85 | 50.56 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_3655 | 75.37 | 50.19 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000029909 retrocopies