Parental gene:

TFB2M, ENSPTRG00000002188

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:1:226002836..226028961(-)


>ENSPTRG00000002188
ATGTGGATCCCAGTGGTCGGGCTTCCTCGGCGGCTGAGGCTCTCCGCCTTGGCGGGCGCTGGTCGCTTTTGCATTTTAGG
GTCTGAAGCGGCGACGCGAAAGCATTTGCCGGCGAGGAACCACTGTGGGCTGTCTGACTCCTCTCCGCAGCTGTGGCCCG
AACCGGATTTCAGGAATCCGCCAAGGAAGGCCAGCTTAGACTTTAAGCGTTACGTAACCGATCGGAGATTGGCGGAGACC
CTGGCGCAAATCTATTTGGGAAAACCAAGTAGACCTCCACACCTACTCCTGGAGTGCAATCCAGGTCCTGGAATCCTGAC
TCAGGCATTACTTGAAGCTGGTGCCAAAGTGGTTGCGCTCGAAAGTGACAAAACTTTTATTCCACATTTGGAGTCCTTAG
GAAAAAATCTGGATGGAAAACTACGAGTGATTCACTGTGACTTCTTTAAACTAGATCCTAGAAGTGGTGGAGTAATAAAA
CCACCTGCTATGTCTTCTCGAGGGCTCTTTAAGAATTTGGGAATAGAAGCAGTTCCTTGGACAGCAGACATCCCTTTAAA
AGTAATTGGAATGTTCCCAAGTAGAGGTGAGAAAAGGGCACTTTGGAAACTCGCATATGACTTGTATTCCTGTACTTCTA
TATATAAATTTGGACGAATAGAAGTAAATATGTTTATTGGTGAAAAAGAATTCCAGAAACTAATGGCAGATCCCGGAAAT
CCAGACTTGTATCATGTATTAAGTGTTATCTGGCAATTAGCTTGTGAGATTAAGGTTCTGCACATGGAGCCTTGGTCATC
ATTTGATATATACACCCGAAAAGGGCCGCTGGAAAACCCAAAGCGTAGGGAATTATTAGACCAATTACAACAAAAGCTGT
ATCTTATTCAAATGACTCCTCGTCAGAATTTATTTACCAAGAACTTAACACCTATGAACTATAATATATTTTTTCACTTG
TTAAAGCACTGTTTCGGGAGGCGCAGCGCCACTGTAATAGACCACTTACGTTCATTGACTCCACTTGATGCGAGAGATAT
ATTGATGCAAATAGGAAAACAGGAGGATGAGAAAGTAGTTAACATGCACCCTCAAGACTTCAAAACACTTTTTGAAACTA
TAGAGCGTTCCAAAGATTGTGCTTATAAATGGCTGTATGATGAAACCCTGGAAGATAGGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 4 .47 RPM
SRP007412_cerebellum 4 .30 RPM
SRP007412_heart 7 .26 RPM
SRP007412_kidney 12 .79 RPM
SRP007412_liver 17 .68 RPM
SRP007412_testis 6 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000013225 ortholog_one2one 1 retrogene
retro_cpor_451,
Homo sapiens ENSG00000162851 ortholog_one2one 1 retrogene
retro_hsap_3548,
Gorilla gorilla ENSGGOG00000001095 ortholog_one2one 1 retrogene
retro_ggor_2396,
Myotis lucifugus ENSMLUG00000003923 ortholog_one2one 1 retrogene
retro_mluc_1302,
Macaca mulatta ENSMMUG00000022915 ortholog_one2one 1 retrogene
retro_mmul_1814,
Nomascus leucogenys ENSNLEG00000004146 ortholog_one2one 1 retrogene
retro_nleu_2323,
Oryctolagus cuniculus ENSOCUG00000013727 ortholog_one2many 2 retrogenes
retro_ocun_1557, retro_ocun_236,
Otolemur garnettii ENSOGAG00000007823 ortholog_one2one 2 retrogenes
retro_ogar_1444, retro_ogar_2187,
Pongo abelii ENSPPYG00000000046 ortholog_one2one 1 retrogene
retro_pabe_3039,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2412 77.22 80.15
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Download FASTA sequences of all ENSPTRG00000002188 retrocopies