Parental gene: | RHOJ, ENSPTRG00000006424 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 14:62267969..62356763(+) |
>ENSPTRG00000006424
ATGAACTGCAAAGAGGGAACTGACAGCAGCTGCGGCTGCAGGGGCAACGACGAGAAGAAGATGTTGAAGTGTGTGGTGGT
GGGGGACGGTGCCGTGGGGAAAACCTGCCTGCTGATGAGCTACGCCAACGACGCCTTCCCAGAGGAATACGTGCCCACTG
TGTTTGACCACTATGCAGTTACTGTGACTGTGGGAGGCAAGCAACACTTGCTCGGACTGTATGACACCGCGGGACAGGAG
GACTACAACCAGCTGAGGCCGCTCTCCTACCCCAACACGGATGTGTTTTTGATCTGCTTCTCTGTCGTAAACCCTGCCTC
TTACCACAATGTCCAGGAGGAATGGGTCCCCGAGCTCAAGGACTGCATGCCTCACGTGCCTTATGTCCTCATAGGGACCC
AGATTGATCTCCGTGATGACCCAAAAACCTTGGCCCGTTTGCTGTATATGAAAGAGAAACCTCTCACTTACGAGCATGGT
GTGAAGCTCGCAAAAGCGATCGGAGCACAGTGCTACTTGGAATGTTCAGCTCTGACTCAGAAAGGTCTCAAAGCGGTTTT
TGATGAAGCAATCCTCACCATTTTCCACCCCAAGAAAAAGAAGAAACGCTGTTCTGAGGGTCACAGCTGCTGTTCAATTA
TCTGA
ATGAACTGCAAAGAGGGAACTGACAGCAGCTGCGGCTGCAGGGGCAACGACGAGAAGAAGATGTTGAAGTGTGTGGTGGT
GGGGGACGGTGCCGTGGGGAAAACCTGCCTGCTGATGAGCTACGCCAACGACGCCTTCCCAGAGGAATACGTGCCCACTG
TGTTTGACCACTATGCAGTTACTGTGACTGTGGGAGGCAAGCAACACTTGCTCGGACTGTATGACACCGCGGGACAGGAG
GACTACAACCAGCTGAGGCCGCTCTCCTACCCCAACACGGATGTGTTTTTGATCTGCTTCTCTGTCGTAAACCCTGCCTC
TTACCACAATGTCCAGGAGGAATGGGTCCCCGAGCTCAAGGACTGCATGCCTCACGTGCCTTATGTCCTCATAGGGACCC
AGATTGATCTCCGTGATGACCCAAAAACCTTGGCCCGTTTGCTGTATATGAAAGAGAAACCTCTCACTTACGAGCATGGT
GTGAAGCTCGCAAAAGCGATCGGAGCACAGTGCTACTTGGAATGTTCAGCTCTGACTCAGAAAGGTCTCAAAGCGGTTTT
TGATGAAGCAATCCTCACCATTTTCCACCCCAAGAAAAAGAAGAAACGCTGTTCTGAGGGTCACAGCTGCTGTTCAATTA
TCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 2 .47 RPM |
| SRP007412_cerebellum | 3 .73 RPM |
| SRP007412_heart | 9 .65 RPM |
| SRP007412_kidney | 6 .01 RPM |
| SRP007412_liver | 4 .78 RPM |
| SRP007412_testis | 2 .32 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000001761 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000007948 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000018910 | other_paralog | 4 retrogenes | |
| Vicugna pacos | ENSVPAG00000004859 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_910 | 81.56 | 83.64 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1643 | 78.87 | 65.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_2091 | 75.00 | 71.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_2971 | 76.32 | 88.79 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000006424 retrocopies