Parental gene:

PPP4C, ENSPTRG00000007984

Aliases:None
Description:Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:H2RA87]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:16:30223214..30232421(+)


>ENSPTRG00000007984
ATGGCGGAGATCAGCGACCTGGACCGGCAGATCGAGCAGCTGCGTCGCTGCGAGCTCATCAAGGAGAGCGAAGTCAAGGC
CCTGTGCGCTAAGGCCAGAGAGATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTGTGCGGCG
ACATCCATGGACAATTCTATGACCTCAAAGAGCTGTTCAGAGTAGGTGGCGATGTCCCTGAGACCAACTACCTCTTCATG
GGGGACTTTGTGGACCGTGGCTTCTATAGCGTCGAAACGTTCCTCCTGCTGCTGGCACTTAAGGTTCGCTATCCTGATCG
CATCACGCTGATCCGGGGCAACCATGAGAGTCGCCAGATCACGCAGGTCTATGGCTTCTACGATGAGTGCCTGCGCAAGT
ACGGCTCGGTGACTGTGTGGCGCTACTGCACTGAGATCTTTGACTACCTCAGCCTGTCAGCCATCATCGATGGCAAGATC
TTCTGCGTGCACGGGGGCCTCTCCCCCTCCATCCAGACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAGAGGTGCC
TCATGATGGGCCCATGTGTGACCTCCTCTGGTCTGACCCAGAAGACACCACAGGCTGGGGCGTGAGCCCCCGAGGAGCCG
GCTACCTATTTGGCAGTGACGTGGTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCACCAACTG
GTGATGGAAGGTTACAAGTGGCACTTCAATGAGACCGTGCTCACTGTGTGGTCGGCACCCAACTACTGCTACCGCTGTGG
GAATGTGGCAGCCATCTTGGAGCTGGACGAGCATCTCCAGAAAGATTTCATCATCTTTGAGGCTGCTCCCCAAGAGACAC
GGGGCATCCCCTCCAAGAAGCCCGTGGCCGACTACTTCCTGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 29 .21 RPM
SRP007412_cerebellum 29 .47 RPM
SRP007412_heart 13 .55 RPM
SRP007412_kidney 74 .87 RPM
SRP007412_liver 114 .57 RPM
SRP007412_testis 41 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015223 ortholog_one2one 1 retrogene
retro_amel_286,
Canis familiaris ENSCAFG00000017089 ortholog_one2one 1 retrogene
retro_cfam_16,
Ciona savignyi ENSCSAVG00000004266 ortholog_one2one 1 retrogene
retro_csav_27,
Equus caballus ENSECAG00000022179 ortholog_one2one 1 retrogene
retro_ecab_911,
Felis catus ENSFCAG00000014171 ortholog_one2one 1 retrogene
retro_fcat_1043,
Macropus eugenii ENSMEUG00000000397 ortholog_one2one 5 retrogenes
retro_meug_1014, retro_meug_1188, retro_meug_1336, retro_meug_560, retro_meug_859,
Ornithorhynchus anatinus ENSOANG00000008136 ortholog_one2one 1 retrogene
retro_oana_25,
Tursiops truncatus ENSTTRG00000005532 ortholog_one2one 1 retrogene
retro_ttru_1015,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_28 66.23 98.05
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Download FASTA sequences of all ENSPTRG00000007984 retrocopies