Parental gene:

CENPV, ENSPTRG00000008810

Aliases:CENPV, PRR6
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:GL392652.1:481060..492334(-)


>ENSPTRG00000008810
ATGCGGCGATCGAGGAGCTCTGCGGCCGCCAAGCTGCGCGGGCAGAAGCGGTCCGGGGCCTCCGCGGCCCCCGCGGCCTC
CGCGGCCGCTGCCTTGGCACCCAGCGCCACCCGCACACGGCGCTCCGCTAGCCAGGCCGGGAGCAAGAGCCAGGCGGTGG
AGAAGCCGCCGTCGGAGAAGCCGCGGCTGAGGCGCTCGTCGCCGCGGGCCCAGGAGGAGGGCCCGGGGGAGCCGCCGCCG
CCGGAGCTGGCGTTGCTCCCGCCACCGCCGCCGCCGCCGCCGACTCCCGCGACCCCGACGTCCTCGGCGTCCAACCTGGA
CCTGGGCGAGCAGCGGGAGCGCTGGGAGACGTTCCAGAAGCGGCAGAAGCTTACCTCCGAGGGTGCCGCCAAGCTCCTGC
TAGACACCTTTGAATACCAGGGCCTGGTGAAGCACACAGGAGGCTGCCACTGTGGAGCAGTTCGTTTTGAAGTTTGGGCC
TCAGCAGACTTGCATATATTTGACTGCAATTGCAGCATTTGCAAGAAGAAGCAGAATAGACACTTCATCGTTCCAGCTTC
TCGCTTCAAGCTCCTGAAGGGAGCTGAGCACATAACGACTTACACGTTCAATACTCACAAAGCCCAGCATACCTTCTGTA
AGAGATGTGGCGTTCAGAGCTTCTATACTCCACGATCAAACCCTGGAGGCTTCGGAATTGCCCCCCACTGCCTGGATGAG
GGCACTGTGCGGAGTATGGTCACTGAGGAATTCAATGGCAGCGATTGGGAGAAGGCCATGAAAGAGCACAAGACCATCAA
GAACATGTCTAAAGAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 21 .15 RPM
SRP007412_cerebellum 16 .38 RPM
SRP007412_heart 3 .15 RPM
SRP007412_kidney 11 .45 RPM
SRP007412_liver 14 .14 RPM
SRP007412_testis 14 .33 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004716 ortholog_one2one 5 retrogenes
retro_amel_1859, retro_amel_1870, retro_amel_1909, retro_amel_1926, retro_amel_924,
Canis familiaris ENSCAFG00000018019 ortholog_one2one 2 retrogenes
retro_cfam_2153, retro_cfam_2155,
Homo sapiens ENSG00000166582 ortholog_one2one 3 retrogenes
retro_hsap_4683, retro_hsap_4833, retro_hsap_4834,
Macropus eugenii ENSMEUG00000002027 ortholog_one2one 1 retrogene
retro_meug_519,
Microcebus murinus ENSMICG00000007166 ortholog_one2one 1 retrogene
retro_mmur_1491,
Mustela putorius furo ENSMPUG00000010146 ortholog_one2one 2 retrogenes
retro_mputfur_1195, retro_mputfur_39,
Nomascus leucogenys ENSNLEG00000014726 ortholog_one2one 1 retrogene
retro_nleu_2709,
Otolemur garnettii ENSOGAG00000029365 ortholog_one2one 1 retrogene
retro_ogar_99,
Ictidomys tridecemlineatus ENSSTOG00000012221 ortholog_one2one 2 retrogenes
retro_itri_110, retro_itri_1540,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_3216 63.10 68.38
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Download FASTA sequences of all ENSPTRG00000008810 retrocopies