Parental gene: | CDK5RAP3, ENSPTRG00000009345 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 17:9627053..9638160(-) |
>ENSPTRG00000009345
ATGAGAAGGCAAAGCATGACAAGTGCCACAAGAGACCTGCACACTGCTCTGGATGGTAAAGCGACGCAAGGAGGGAAGAA
GGACCATCAGCACGTGCCCATCGACATCCAGACCAGCAAGCTGCTCGATTGGCTGGTGGACAGAAGGCACTGCAGCCTGA
AATGGCAGAGTCTGGTGCTGACGATCCGCGAGAAGATCAATGCTGCCATCCAGGACATGCCAGAGAGCGAAGAGATCGCC
CAGCTGCTGTCTGGGTCCTACATTCACTACTTTCACTGCCTAAGAATCCTGGACCTTCTCAAAGGCACAGAGGCCTCCAC
GAAGAATATTTTTGGCCGATACTCTTCACAGCGGATGAAGGATTGGCAGGAGATTATAGCCCTGTATGAGAAGGACAACA
CCTACTTAGTGGAACTCTCTAGCCTCCTGGTTCGGAATGTCAACTATGAGATCCCCTCACTGAAGAAGCAGATTGCCAAG
TGCCAGCAGCTGCAACAAGAATACAGCCGCAAGGAGGAGGAGTGCCAGGCAGGGGCTGCCGAGATGCGGGAGCAGTTCTA
CCACTCCTGCAAGCAGTATGGCATCATGGGCGAAAATGTCCGAGGAGAACTGCTGGCCCTGGTGAAGGACCTGCCGAGTC
AGCTGGCTGAGATTGGGGCAGCGGCTCAGCAGTCCCTGGGGGAAGCCATTGACGTGTACCAGGCATCTGTGGGGTTTGTG
TGTGAGAGCCCCACAGAGCAGGTGTTGCCAATGCTGCGGTTCGTGCAGAAGCGGGGAAACTCAACGGTGTACGAGTGGAG
GACAGGGACAGAGCCCTCTGTGGTGGAACGACCCCACCTCGAGGAGCTTCCTGAGCAGGTGGCAGAAGATGCGATTGACT
GGGGCGACTTTGGGGTAGAGGCAGTGTCTGAGGGGACTGACTCTGGCATCTCTGCTGAGGCTGCTGGAATCGACTGGGGC
ATCTTCCCGGAATCAGATTCAAAGGATCCTGGAGGTGATGGGATAGACTGGGGAGACGATGCTGTTGCTTTGCAGATCAC
AGTGCTGGAAGCAGGAACCCAGGCTCCAGAAGGTGTTGCCAGGGGCCCAGATGCCCTGACACTGCTTGAATACACTGAGA
CCCGGAATCAGTTCCTTGATGAGCTCATGGAGCTTGAGATCTTCTTAGCCCAGAGAGCAGTGGAGTTGAGTGAGGAGGCA
GATGTCCTGTCTGTGAGCCAGTTCCAGCTGGCTCCAGCCATCCTGCAGGGCCAGACCAAAGAGAAGATGGTTACCATGGT
GTCAGTGCTGGAGGATCTGATTGGCAAGCTTACCAGTCTTCAGTTGCAACACCTGTTTATGATCCTGGCCTCACCAAGGT
ATGTGGACCGAGTGACTGAATTCCTCCAGCAAAAGCTGAAGCAGTCCCAGCTGCTGGCTTTGAAGAAAGAGCTGATGGTG
CAGAAGCAGCAGGAGGCACTTGAGGAGCAGGCGGCTCTGGAGCCTAAGCTGGACCTGCTGCTGGAGAAGACCAAGGAGCT
GCAGAAGCTGATTGAAGCTGACATCTCCAGGAGGTACAGTGGGCGCCCTGTGAACCTGATGGGAACCTCTCTGTGA
ATGAGAAGGCAAAGCATGACAAGTGCCACAAGAGACCTGCACACTGCTCTGGATGGTAAAGCGACGCAAGGAGGGAAGAA
GGACCATCAGCACGTGCCCATCGACATCCAGACCAGCAAGCTGCTCGATTGGCTGGTGGACAGAAGGCACTGCAGCCTGA
AATGGCAGAGTCTGGTGCTGACGATCCGCGAGAAGATCAATGCTGCCATCCAGGACATGCCAGAGAGCGAAGAGATCGCC
CAGCTGCTGTCTGGGTCCTACATTCACTACTTTCACTGCCTAAGAATCCTGGACCTTCTCAAAGGCACAGAGGCCTCCAC
GAAGAATATTTTTGGCCGATACTCTTCACAGCGGATGAAGGATTGGCAGGAGATTATAGCCCTGTATGAGAAGGACAACA
CCTACTTAGTGGAACTCTCTAGCCTCCTGGTTCGGAATGTCAACTATGAGATCCCCTCACTGAAGAAGCAGATTGCCAAG
TGCCAGCAGCTGCAACAAGAATACAGCCGCAAGGAGGAGGAGTGCCAGGCAGGGGCTGCCGAGATGCGGGAGCAGTTCTA
CCACTCCTGCAAGCAGTATGGCATCATGGGCGAAAATGTCCGAGGAGAACTGCTGGCCCTGGTGAAGGACCTGCCGAGTC
AGCTGGCTGAGATTGGGGCAGCGGCTCAGCAGTCCCTGGGGGAAGCCATTGACGTGTACCAGGCATCTGTGGGGTTTGTG
TGTGAGAGCCCCACAGAGCAGGTGTTGCCAATGCTGCGGTTCGTGCAGAAGCGGGGAAACTCAACGGTGTACGAGTGGAG
GACAGGGACAGAGCCCTCTGTGGTGGAACGACCCCACCTCGAGGAGCTTCCTGAGCAGGTGGCAGAAGATGCGATTGACT
GGGGCGACTTTGGGGTAGAGGCAGTGTCTGAGGGGACTGACTCTGGCATCTCTGCTGAGGCTGCTGGAATCGACTGGGGC
ATCTTCCCGGAATCAGATTCAAAGGATCCTGGAGGTGATGGGATAGACTGGGGAGACGATGCTGTTGCTTTGCAGATCAC
AGTGCTGGAAGCAGGAACCCAGGCTCCAGAAGGTGTTGCCAGGGGCCCAGATGCCCTGACACTGCTTGAATACACTGAGA
CCCGGAATCAGTTCCTTGATGAGCTCATGGAGCTTGAGATCTTCTTAGCCCAGAGAGCAGTGGAGTTGAGTGAGGAGGCA
GATGTCCTGTCTGTGAGCCAGTTCCAGCTGGCTCCAGCCATCCTGCAGGGCCAGACCAAAGAGAAGATGGTTACCATGGT
GTCAGTGCTGGAGGATCTGATTGGCAAGCTTACCAGTCTTCAGTTGCAACACCTGTTTATGATCCTGGCCTCACCAAGGT
ATGTGGACCGAGTGACTGAATTCCTCCAGCAAAAGCTGAAGCAGTCCCAGCTGCTGGCTTTGAAGAAAGAGCTGATGGTG
CAGAAGCAGCAGGAGGCACTTGAGGAGCAGGCGGCTCTGGAGCCTAAGCTGGACCTGCTGCTGGAGAAGACCAAGGAGCT
GCAGAAGCTGATTGAAGCTGACATCTCCAGGAGGTACAGTGGGCGCCCTGTGAACCTGATGGGAACCTCTCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 74 .20 RPM |
| SRP007412_cerebellum | 76 .97 RPM |
| SRP007412_heart | 19 .73 RPM |
| SRP007412_kidney | 92 .16 RPM |
| SRP007412_liver | 74 .83 RPM |
| SRP007412_testis | 144 .38 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000108465 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000022994 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002109 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000004107 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000008888 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1425 | 94.47 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000009345 retrocopies