Parental gene:

GAPDHS, ENSPTRG00000010848

Aliases:GAPDHS, GAPDS
Description:glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:HGNC Symbol;Acc:24864]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:19:40738071..40750418(+)


>ENSPTRG00000010848
ATGTCGAAGCGCGACATCGTCCTCACCAATGTCACCGTTGTCCAGTTGCTGCGACAGCCGTGCCCGGTGACCAGAGCACC
GCCCCCACCTGAGCCTAAGGCTGAAGTAGAGCCCCAGCCACAACCAGAGCCCACACCAGTCAGGGAGGAAATAAAGCCAC
CACCGCCACCACTGCCTCCTCGCCCTGCTACTCCTCCTCCTAAGATGGTGTCTGTGGCCCGGGAGCTGACTGTGGGCATC
AATGGATTTGGACGCATCGGTCGCCTGGTCCTGCGCGCCTGCATGGAGAAGGGTGTTAAGGTGGTGGCTGTGAATGATCC
ATTCATTGACCCGGAATACATGGTGTACATGTTTAAGTATGACTCCACCCACGGCCGATACAAGGGAAGTGTGGAATTCA
GGAATGGACAACTGGTCGTGGACAACCATGAGATCTCTGTCTACCAGTGCAAAGAGCCCAAACAGATCCCCTGGAGGGCT
GTCGGGAGCCCCTACGTGGTGGAGTCCACAGGCGTGTACCTCTCCATACAGGCAGCTTCGGACCACATCTCGGCAGGTGC
TCAACGTGTGGTCATCTCCGCGCCCTCACCGGATGCACCAACGTTCGTCATGGGTGTGAATGAAAATGACTATAACCCTG
GCTCCATGAACATTGTGAGCAACGCGTCCTGCACCACCAACTGTTTGGCTCCCCTCGCCAAAGTCATCCACGAGCAATTT
GGGATCGTGGAAGGGTTGATGACCACAATCCATTCCTACACGGCCACCCAGAAGACGGTGGACGGGCCATCAAGGAAGGC
CTGGCGAGATGGGCGGGGTGCCCACCAGAACATCATCCCAGCCTCCACTGGGGCTGCGAAAGCTGTGACCAAAGTCATCC
CAGAGCTCAAAGGGAAGCTGACAGGGATGGCGTTCCGGGTACCAACCCCGGATGTGTCTGTCGTGGACCTGACCTGCCGC
CTCGCCCAGCCTGCCCCCTACTCAGCCATCAAGGAGGCTGTAAAAGCAGCAGCCAAGGGGCCCATGGCTGGCATCCTTGC
CTACACCGAGGATGAGGTCGTCTCTATGGACTTCCTCGGTGATACCCACTCGTCCATCTTCGATGCTAAGGCCGGCATTG
CGCTCAATGACAATTTCGTGAAGCTCATTTCATGGTACGACAATGAATATGGCTACAGTCACCGGGTGGTCGACCTCCTC
CGCTACATGTTCAGCCGAGACAAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 2 .54 RPM
SRP007412_cerebellum 4 .34 RPM
SRP007412_heart 0 .93 RPM
SRP007412_kidney 3 .03 RPM
SRP007412_liver 1 .54 RPM
SRP007412_testis 280 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Mus musculus ENSMUSG00000061099 ortholog_one2one 2 retrogenes
retro_mmus_3024, retro_mmus_528,
Otolemur garnettii ENSOGAG00000009491 ortholog_one2one 25 retrogenes
retro_ogar_1269, retro_ogar_1332, retro_ogar_1460, retro_ogar_1472, retro_ogar_1798, retro_ogar_1968, retro_ogar_2074, retro_ogar_2266, retro_ogar_2376, retro_ogar_2446, retro_ogar_2469, retro_ogar_2631, retro_ogar_2647, retro_ogar_2884, retro_ogar_2957, retro_ogar_315, retro_ogar_3197, retro_ogar_3262, retro_ogar_3517, retro_ogar_355, retro_ogar_468, retro_ogar_582, retro_ogar_632, retro_ogar_658, retro_ogar_785,
Petromyzon marinus ENSPMAG00000009321 ortholog_one2many 1 retrogene
retro_pmar_9,
Pan troglodytes ENSPTRG00000004577 within_species_paralog 43 retrogenes
retro_ptro_1008, retro_ptro_1009, retro_ptro_1065, retro_ptro_1133, retro_ptro_1337, retro_ptro_1390, retro_ptro_1513, retro_ptro_1539, retro_ptro_1573, retro_ptro_173, retro_ptro_1832, retro_ptro_1847, retro_ptro_186, retro_ptro_187, retro_ptro_188, retro_ptro_189, retro_ptro_190, retro_ptro_191, retro_ptro_1932, retro_ptro_2001, retro_ptro_2092, retro_ptro_2309, retro_ptro_2365, retro_ptro_2409, retro_ptro_2447, retro_ptro_2459, retro_ptro_248, retro_ptro_2487, retro_ptro_2506, retro_ptro_2777, retro_ptro_285, retro_ptro_2939, retro_ptro_2986, retro_ptro_3196, retro_ptro_3209, retro_ptro_322, retro_ptro_3310, retro_ptro_369, retro_ptro_507, retro_ptro_661, retro_ptro_748, retro_ptro_811, retro_ptro_815,
Tupaia belangeri ENSTBEG00000008617 ortholog_one2one 16 retrogenes
retro_tbel_1017, retro_tbel_1193, retro_tbel_124, retro_tbel_1650, retro_tbel_1685, retro_tbel_2010, retro_tbel_2486, retro_tbel_249, retro_tbel_2793, retro_tbel_2832, retro_tbel_2873, retro_tbel_2929, retro_tbel_3117, retro_tbel_425, retro_tbel_4292, retro_tbel_4346,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2211 54.84 81.62
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Download FASTA sequences of all ENSPTRG00000010848 retrocopies