Parental gene:

CCT7, ENSPTRG00000012060

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:2A:74197333..74216095(+)


>ENSPTRG00000012060
ATGATGCCCACACCAGTTATCCTATTGAAAGAGGGGACTGATAGCTCCCAAGGCATCCCCCAGCTTGTGAGTAACATCAG
TGCCTGCCAGGTGATTGCTGAGGCTGTAAGAACTACCCTGGGTCCCCGTGGCATGGACAAGCTTATTGTAGATGGCAGAG
GCAAAGCAACAATTTCTAATGATGGGGCCACAATTCTGAAACTTCTTGATGTTGTCCATCCTGCAGCAAAGACTTTGGTA
GACATTGCCAAATCCCAAGATGCTGAGGTGGGTGATGGCACCACCTCAGTGACCTTGCTGGCTGCAGAGTTTCTGAAGCA
GGTGAAACCCTATGTGGAGGAAGGTTTACACCCCCAGATCATCATTCGAGCTTTCCGCACAGCCACCCAGCTGGCAGTTA
ACAAGATCAAAGAGATTGCTGTGACCGTGAAGAAGGCAGATAAAGTGGAGCAGAGGAAGCTGCTGGAAAAGTGTGCCATG
ACCGCTCTGAGCTCCAAGCTGATCTCCCAGCAGAAAGCTTTCTTTGCTAAGATGGTGGTGGATGCAGTGATGATGCTCGA
TGATTTGCTGCAGCTTAAAATGATTGGAATCAAGAAGGTACAGGGTGGAGCCCTCGAGGATTCTCAGCTGGTAGCTGGCG
TTGCATTCAAGAAGACTTTCTCTTACGCTGGGTTTGAAATGCAACCCAAAAAGTACCACAATCCCAAGATTGCCCTTTTG
AATGTCGAGCTCGAGTTGAAAGCTGAGAAAGACAATGCTGAGATAAGAGTCCACACAGTTGAGGATTATCAGGCAATTGT
TGATGCTGAGTGGAACATTCTCTATGACAAGTTAGAGAAGATCCATCATTCTGGAGCCAAAGTTGTCTTGTCCAAACTCC
CCATTGGGGATGTGGCCACCCAGTACTTTGCTGACAGGGACATGTTCTGTGCTGGCCGAGTACCTGAGGAGGATCTGAAG
AGGACAATGATGGCCTGTGGAGGCTCAATCCAGACCAGTGTGAATGCTCTGTCAGCAGATGTGCTGGGTCGATGCCAGGT
GTTTGAAGAGACCCAGATTGGAGGCGAGAGGTACAATTTTTTTACTGGCTGCCCCAAGGCCAAGACATGCACCTTCATCC
TCCGTGGCGGTGCCGAGCAGTTTATGGAGGAGACAGAGCGGTCCCTGCATGATGCCATCATGATCGTCAGGAGGGCCATC
AAGAATGATTCAGTGGTGGCTGGTGGCGGGGCCATTGAGATGGAGCTCTCCAAGTACCTGCGGGATTACTCAAGGACTAT
TCCAGGAAAACAGCAGCTGTTGATTGGGGCATATGCCAAGGCCTTGGAGATTATCCCACGCCAGCTGTGTGACAATGCTG
GCTTTGATGCCACAAACATTCTCAACAAGCTGCGGGCTCGGCATGCCCAGGGGGGTACATGGTATGGAGTAGACATCAAC
AACGAGGACATTGCTGACAACTTTGAAGCCTTCGTGTGGGAGCCAGCTATGGTGCGGATCAATGCGCTGACAGCAGCCTC
TGAGGCTGCGTGCCTGATCGTGTCTGTAGATGAAACCATCAAGAACCCCCGCTCGACTGTGGATGCTCCCACAGCAGCAG
GCCGGGGCCGTGGTCGTGGCCGCCCCCACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 111 .86 RPM
SRP007412_cerebellum 151 .64 RPM
SRP007412_heart 86 .16 RPM
SRP007412_kidney 105 .65 RPM
SRP007412_liver 96 .76 RPM
SRP007412_testis 527 .13 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000008879 ortholog_one2many 1 retrogene
retro_cfam_151,
Cavia porcellus ENSCPOG00000019869 ortholog_one2one 1 retrogene
retro_cpor_1458,
Homo sapiens ENSG00000135624 ortholog_one2one 1 retrogene
retro_hsap_3354,
Gorilla gorilla ENSGGOG00000007766 ortholog_one2one 1 retrogene
retro_ggor_2274,
Macropus eugenii ENSMEUG00000000416 ortholog_one2one 1 retrogene
retro_meug_1995,
Macaca mulatta ENSMMUG00000012448 ortholog_one2one 1 retrogene
retro_mmul_2093,
Nomascus leucogenys ENSNLEG00000010414 ortholog_one2one 1 retrogene
retro_nleu_1175,
Otolemur garnettii ENSOGAG00000009162 ortholog_one2one 2 retrogenes
retro_ogar_2001, retro_ogar_2698,
Pongo abelii ENSPPYG00000012297 ortholog_one2one 1 retrogene
retro_pabe_2760,
Rattus norvegicus ENSRNOG00000015630 ortholog_one2one 2 retrogenes
retro_rnor_2179, retro_rnor_535,
Tupaia belangeri ENSTBEG00000002066 ortholog_one2one 2 retrogenes
retro_tbel_3708, retro_tbel_3751,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2133 75.08 58.20
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Download FASTA sequences of all ENSPTRG00000012060 retrocopies