Parental gene: | Cct7, ENSRNOG00000015630 |
| Aliases: | None |
| Description: | T-complex protein 1 subunit eta [Source:RefSeq peptide;Acc:NP_001100073] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 4:181812637..181829880(+) |
>ENSRNOG00000015630
ATGATGCCCACACCTGTTATCCTGTTGAAAGAGGGTACTGATAGCTCCCAAGGCATCCCTCAGCTTGTGAGTAACATCAG
TGCCTGCCAAGTGATTGCTGAGGCTGTAAGAACCACCCTGGGTCCCCGTGGCATGGACAAACTTATTGTGGATGGCCGAG
GCAAAGCAACAATTTCTAATGATGGGGCCACAATTCTGAAACTCCTTGATGTTGTCCATCCTGCAGCAAAGACTTTAGTG
GATATTGCCAAATCCCAAGACGCTGAGGTTGGTGATGGCACCACCTCAGTGACCCTGCTGGCTGCGGAGTTTCTGAAGCA
GGTGAAGCCCTACGTGGAGGAAGGTTTACACCCTCAGATCATCATCAGAGCCTTCCGCACAGCCACCCAGTTGGCTGTTA
ATAAAATCAAAGAGATAGCTGTGACCGTGAAGAAGCAAGATAAAGTAGAACAGAGGAAGATGCTAGAGAAGTGTGCAATG
ACTGCCCTGAGCTCCAAGCTGATCTCCCAGCAGAAGGTCTTCTTTGCCAAGATGGTGGTTGATGCTGTGATGATGCTTGA
CGAGTTGCTGCAGCTTAAAATGATTGGCATCAAGAAGGTGCAGGGTGGAGCCCTGGAGGAGTCTCGACTAGTGGCTGGTG
TTGCGTTCAAGAAGACGTTCTCTTATGCTGGGTTTGAAATGCAGCCCAAGAAGTATAAGAACCCCAAGATTGCCCTCTTA
AATGTTGAGCTTGAACTGAAAGCAGAGAAAGATAATGCTGAAATCAGGGTCCACACAGTGGAGGATTACCAGGCAATTGT
TGATGCCGAGTGGAACATTCTCTATGACAAGTTAGAGAAGATTCATCAGTCTGGAGCCAAAGTCATCTTGTCTAAACTCC
CTATTGGGGATGTGGCCACCCAGTACTTTGCTGATAGGGACATGTTCTGTGCTGGCCGTGTACCTGAGGAGGATCTGAAG
AGGACGATGATGGCTTGTGGAGGCTCAATCCAGACCAGTGTGAATGCTCTGATTCCAGATGTGCTGGGCCGCTGCCAGGT
GTTTGAAGAGACCCAAATTGGAGGAGAGAGGTACAATTTCTTCACTGGCTGCCCTAAGGCCAAGACATGTACGATCATTC
TCCGTGGTGGTGCTGAGCAGTTTATGGAGGAGACAGAGAGGTCCCTACATGATGCCATCATGATTGTGAGGAGGGCCATC
AAGAACGACTCTGTGGTGGCTGGTGGTGGAGCCATTGAGATGGAGCTTTCCAAATACCTGCGGGACTACTCAAGGACCAT
TCCAGGGAAACAGCAGCTGTTGATCGGGGCATATGCCAAGGCCCTGGAGATTATTCCACGACAGCTGTGTGACAACGCTG
GCTTTGATGCCACAAACATCCTCAACAAACTGCGGGCTCGACATGCACAGGGGGGCATGTGGTATGGGGTGGACATCAAC
AACGAGGACATTGCTGACAACTTCCAGGCATTTGTGTGGGAGCCAGCCATGGTGCGCATCAACGCTCTGACAGCAGCTTC
TGAGGCTGCGTGCCTGATTGTGTCTGTGGATGAGACTATCAAGAACCCCCGCTCCACTGTGGATGCTCCAGCTCCAGCAG
CTGGCCGGGGCAGAGGCCAGGGCCGCTTCCATTGA
ATGATGCCCACACCTGTTATCCTGTTGAAAGAGGGTACTGATAGCTCCCAAGGCATCCCTCAGCTTGTGAGTAACATCAG
TGCCTGCCAAGTGATTGCTGAGGCTGTAAGAACCACCCTGGGTCCCCGTGGCATGGACAAACTTATTGTGGATGGCCGAG
GCAAAGCAACAATTTCTAATGATGGGGCCACAATTCTGAAACTCCTTGATGTTGTCCATCCTGCAGCAAAGACTTTAGTG
GATATTGCCAAATCCCAAGACGCTGAGGTTGGTGATGGCACCACCTCAGTGACCCTGCTGGCTGCGGAGTTTCTGAAGCA
GGTGAAGCCCTACGTGGAGGAAGGTTTACACCCTCAGATCATCATCAGAGCCTTCCGCACAGCCACCCAGTTGGCTGTTA
ATAAAATCAAAGAGATAGCTGTGACCGTGAAGAAGCAAGATAAAGTAGAACAGAGGAAGATGCTAGAGAAGTGTGCAATG
ACTGCCCTGAGCTCCAAGCTGATCTCCCAGCAGAAGGTCTTCTTTGCCAAGATGGTGGTTGATGCTGTGATGATGCTTGA
CGAGTTGCTGCAGCTTAAAATGATTGGCATCAAGAAGGTGCAGGGTGGAGCCCTGGAGGAGTCTCGACTAGTGGCTGGTG
TTGCGTTCAAGAAGACGTTCTCTTATGCTGGGTTTGAAATGCAGCCCAAGAAGTATAAGAACCCCAAGATTGCCCTCTTA
AATGTTGAGCTTGAACTGAAAGCAGAGAAAGATAATGCTGAAATCAGGGTCCACACAGTGGAGGATTACCAGGCAATTGT
TGATGCCGAGTGGAACATTCTCTATGACAAGTTAGAGAAGATTCATCAGTCTGGAGCCAAAGTCATCTTGTCTAAACTCC
CTATTGGGGATGTGGCCACCCAGTACTTTGCTGATAGGGACATGTTCTGTGCTGGCCGTGTACCTGAGGAGGATCTGAAG
AGGACGATGATGGCTTGTGGAGGCTCAATCCAGACCAGTGTGAATGCTCTGATTCCAGATGTGCTGGGCCGCTGCCAGGT
GTTTGAAGAGACCCAAATTGGAGGAGAGAGGTACAATTTCTTCACTGGCTGCCCTAAGGCCAAGACATGTACGATCATTC
TCCGTGGTGGTGCTGAGCAGTTTATGGAGGAGACAGAGAGGTCCCTACATGATGCCATCATGATTGTGAGGAGGGCCATC
AAGAACGACTCTGTGGTGGCTGGTGGTGGAGCCATTGAGATGGAGCTTTCCAAATACCTGCGGGACTACTCAAGGACCAT
TCCAGGGAAACAGCAGCTGTTGATCGGGGCATATGCCAAGGCCCTGGAGATTATTCCACGACAGCTGTGTGACAACGCTG
GCTTTGATGCCACAAACATCCTCAACAAACTGCGGGCTCGACATGCACAGGGGGGCATGTGGTATGGGGTGGACATCAAC
AACGAGGACATTGCTGACAACTTCCAGGCATTTGTGTGGGAGCCAGCCATGGTGCGCATCAACGCTCTGACAGCAGCTTC
TGAGGCTGCGTGCCTGATTGTGTCTGTGGATGAGACTATCAAGAACCCCCGCTCCACTGTGGATGCTCCAGCTCCAGCAG
CTGGCCGGGGCAGAGGCCAGGGCCGCTTCCATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 57 .89 RPM |
| SRP017611_kidney | 116 .47 RPM |
| SRP017611_brain | 134 .16 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000008879 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000019869 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000135624 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000007766 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000000416 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000012448 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010414 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000009162 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000012297 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000012060 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000002066 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_535 | 95.96 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2179 | 78.93 | 65.07 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000015630 retrocopies