Parental gene: | TDGF1, ENSPTRG00000014854 |
| Aliases: | None |
| Description: | teratocarcinoma-derived growth factor 1 [Source:HGNC Symbol;Acc:11701] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 3:47269364..47274229(+) |
>ENSPTRG00000014854
ATGGACTGCAGGAAGATGGCCCGCTTCTCTTACAGTGTGATTTGGATCATGGCCATTTCTAAAGCCTTTGAACTGGGATT
AGTTGCCGGGCTGGGCCATCAGGAATTTGCTCGTCCATCTCGGGGAGACCTGGCCTTCAGAGATGACAGCATTTGGCCCC
AGGAGGAGCCTGCAATTCGGCCTCGGTCTTCCCAGCGTGTGCCGCCCATGGGGATACAGCACAGTAAGGAGCTAAACAGA
ACCTGCTGCCTGAATGGGGGAACCTGCATGCTGGGGTCCTTTTGTGCCTGCCCTCCCTCCTTCTACGGACGGAACTGTGA
GCACGATGTGCGCAAAGAGAACTGTGGGTCTGTGCCCCATGACACCTGGCTGCCCAAGAAGTGTTCCCTGTGTAAATGCT
GGCACGGTCAGCTCCGCTGCTTTCCTCAGGCATTTCTACCCGGCTGCGATGGCCTTGTGATGGATGAGCACCTCGTGGCT
TCCAGGACTCCAGAACTACCACTGTCTGCACGTACTACCACTTTTATGCTAGTTGGCATCTGCCTTTCTATACAAAGCTA
CTATTAA
ATGGACTGCAGGAAGATGGCCCGCTTCTCTTACAGTGTGATTTGGATCATGGCCATTTCTAAAGCCTTTGAACTGGGATT
AGTTGCCGGGCTGGGCCATCAGGAATTTGCTCGTCCATCTCGGGGAGACCTGGCCTTCAGAGATGACAGCATTTGGCCCC
AGGAGGAGCCTGCAATTCGGCCTCGGTCTTCCCAGCGTGTGCCGCCCATGGGGATACAGCACAGTAAGGAGCTAAACAGA
ACCTGCTGCCTGAATGGGGGAACCTGCATGCTGGGGTCCTTTTGTGCCTGCCCTCCCTCCTTCTACGGACGGAACTGTGA
GCACGATGTGCGCAAAGAGAACTGTGGGTCTGTGCCCCATGACACCTGGCTGCCCAAGAAGTGTTCCCTGTGTAAATGCT
GGCACGGTCAGCTCCGCTGCTTTCCTCAGGCATTTCTACCCGGCTGCGATGGCCTTGTGATGGATGAGCACCTCGTGGCT
TCCAGGACTCCAGAACTACCACTGTCTGCACGTACTACCACTTTTATGCTAGTTGGCATCTGCCTTTCTATACAAAGCTA
CTATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .43 RPM |
| SRP007412_cerebellum | 0 .14 RPM |
| SRP007412_heart | 0 .03 RPM |
| SRP007412_kidney | 1 .10 RPM |
| SRP007412_liver | 5 .70 RPM |
| SRP007412_testis | 0 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000002174 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000014508 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000241186 | ortholog_one2one | 7 retrogenes | |
| Gorilla gorilla | ENSGGOG00000003453 | ortholog_one2one | 5 retrogenes | |
| Loxodonta africana | ENSLAFG00000009140 | ortholog_one2one | 4 retrogenes | |
| Microcebus murinus | ENSMICG00000016492 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003088 | ortholog_one2one | 6 retrogenes | |
| Mustela putorius furo | ENSMPUG00000015167 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000032494 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000006143 | ortholog_one2one | 6 retrogenes | |
| Otolemur garnettii | ENSOGAG00000017039 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000013609 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000017299 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1333 | 83.11 | 77.13 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1749 | 85.52 | 77.13 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_1831 | 74.64 | 71.81 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_2319 | 72.67 | 78.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ptro_2685 | 88.18 | 58.51 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ptro_3153 | 97.81 | 72.87 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_ptro_3194 | 72.22 | 66.49 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000014854 retrocopies