Parental gene: | SHISA5, ENSPTRG00000014888 |
| Aliases: | None |
| Description: | protein shisa-5 [Source:RefSeq peptide;Acc:NP_001233356] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 3:49215096..49249384(-) |
>ENSPTRG00000014888
ATGACTGCGCCGGTCCCCGCGCCGCGGATCCTGTTGCCGTTGCTGTTGCTGCTGCTGCTAACGCCGCCTCCGGGTGCGCG
TGGTGAGGTGTGTATGGCTTCCCGTGGACTCAGCCTCTTCCCCGAGTCCTGTCCAGATTTCTGCTGTGGTACCTGTTATG
ACCAATACTGCTGCTCTGACGTGCTGAAGAAATTTGTGTGGAGCGAGGAAAGGTGTGCTGTGCCTGAGGCCAGCGTGCCT
GCCAGTGTAGAGCCGGTGGAGCAGCTGGGCTCGGCGCTGAGGTTTCGCCCTGGCTACAACGACCCCATGTCAGGGTTCGG
AGCGACCTTGGCCGTTGGCCTGACCATCTTTGTGCTGTCTGTCGTCACTATCATCATCTGCTTCACCTGCTCCTGCTGCT
GCCTTTACAAGACGTGCCGCCGACCACGTCCGGTTGTCACCACCACCACATCCACCACTGTGGTGCATGCCCCTTATCCT
CAGCCTCCAAGTGTGCCGCCCAGCTACCCTGGACCAAGCTACCAGGGCTACCACACCATGCCGCCTCAGCCAGGGATGCC
AGCAGCACCCTACCCAATGCAGTACCCACCACCTTACCCAGCCCAGCCCATGGGCCCACCGGCCTACCACGAGACCCTGG
CTGGAGGAGCAGCCGCACCCTACCCCGCCAGCCAGCCTCCTTACAACCCGGCCTACATGGATGCCCCGAAGGCGGCCCTC
TGA
ATGACTGCGCCGGTCCCCGCGCCGCGGATCCTGTTGCCGTTGCTGTTGCTGCTGCTGCTAACGCCGCCTCCGGGTGCGCG
TGGTGAGGTGTGTATGGCTTCCCGTGGACTCAGCCTCTTCCCCGAGTCCTGTCCAGATTTCTGCTGTGGTACCTGTTATG
ACCAATACTGCTGCTCTGACGTGCTGAAGAAATTTGTGTGGAGCGAGGAAAGGTGTGCTGTGCCTGAGGCCAGCGTGCCT
GCCAGTGTAGAGCCGGTGGAGCAGCTGGGCTCGGCGCTGAGGTTTCGCCCTGGCTACAACGACCCCATGTCAGGGTTCGG
AGCGACCTTGGCCGTTGGCCTGACCATCTTTGTGCTGTCTGTCGTCACTATCATCATCTGCTTCACCTGCTCCTGCTGCT
GCCTTTACAAGACGTGCCGCCGACCACGTCCGGTTGTCACCACCACCACATCCACCACTGTGGTGCATGCCCCTTATCCT
CAGCCTCCAAGTGTGCCGCCCAGCTACCCTGGACCAAGCTACCAGGGCTACCACACCATGCCGCCTCAGCCAGGGATGCC
AGCAGCACCCTACCCAATGCAGTACCCACCACCTTACCCAGCCCAGCCCATGGGCCCACCGGCCTACCACGAGACCCTGG
CTGGAGGAGCAGCCGCACCCTACCCCGCCAGCCAGCCTCCTTACAACCCGGCCTACATGGATGCCCCGAAGGCGGCCCTC
TGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 142 .28 RPM |
| SRP007412_cerebellum | 76 .21 RPM |
| SRP007412_heart | 58 .93 RPM |
| SRP007412_kidney | 152 .28 RPM |
| SRP007412_liver | 281 .71 RPM |
| SRP007412_testis | 22 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000002915 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000164054 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000028207 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000010062 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000006485 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013902 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_3128 | 83.08 | 54.17 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000014888 retrocopies