Parental gene:

CCNG2, ENSPTRG00000016196

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:4:52882722..52895887(-)


>ENSPTRG00000016196
ATGAAGGATTTGGGGGCAGAGCACTTGGCAGGTCATGAAGGGGTCCAACTCCTCGGGTTGTTGAACGTCTACCTGGAACA
AGAAGAGAGATTCCAACCTCGAGAAAAAGGGCTGAGTTTGATTGAGGCTACCCCGGAGAATGATAACACTTTGTGTCCAG
GATTGAGAAATGCCAAAGTTGAAGATTTAAGGAGTTTAGCCAACTTTTTTGGATCTTGCACTGAAACTTTTGTCCTGGCT
GTCAATATTTTGGACAGGTTCTTGGCTCTTATGAAGGTGAAACCTAAACATTTGTCTTGCATTGGAGTCTGTTCTTTTTT
GCTGGCTGCTAGAATAGTTGAAGAAGACTGCAATATTCCATCCACTCATGATGTGATCCGGATTAGTCAGTGTAAATGTA
CTGCTTCTGACATAAAACGGATGGAAAAAATAATTTCAGAAAAATTGCACTATGAATTGGAAGCTACTACTGCCTTAAAC
TTTTTGCACTTATACCATACTATTATACTTTGTCATACTTCAGAAAGGAAAGAAATACTGAGCCTTGATAAACTAGAAGC
TCAGCTGAAAGCTTGCAACTGCCGACTCATCTTTTCAAAAGCAAAACCATCTGTATTAGCCTTGTGCCTTCTCAATTTGG
AAGTGGAAACTTTGAAATCTGTTGAATTACTGGAAATTCTCTTGCTAGTTAAAAAACATTCCAAGATTAATGACACTGAG
TTCTTCTACTGGAGAGAGTTGGTTTCTAAATGCCTAGCCGAGTATTCTTCTCCTGAATGTTGCAAACCAGATCTTAAGAA
GCTGGTTTGGATCGTTTCAAGGCGCACAGCCCAGAACCTCCACAACAGCTACTATAGTGTTCCTGAGCTGCCAACGATAC
CTGAGGGGGGTTGTTTTGATGAAAGTGAAAGTGAGGACTCTTGTGAAGATATGAGTTGTGGAGAGGAGAGTCTCAGCAGC
TCTCCTCCCAGTGATCAAGAGTGCACCTTCTTTTTCAACTTCAAAGTGGCACAAACACTGTGCTTTCCATCTTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 24 .13 RPM
SRP007412_cerebellum 57 .14 RPM
SRP007412_heart 4 .55 RPM
SRP007412_kidney 48 .90 RPM
SRP007412_liver 6 .78 RPM
SRP007412_testis 6 .85 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013793 ortholog_one2one 1 retrogene
retro_amel_960,
Dasypus novemcinctus ENSDNOG00000005210 ortholog_one2one 1 retrogene
retro_dnov_2498,
Felis catus ENSFCAG00000026008 ortholog_one2one 1 retrogene
retro_fcat_1062,
Macropus eugenii ENSMEUG00000008707 ortholog_one2one 1 retrogene
retro_meug_1962,
Macaca mulatta ENSMMUG00000000914 ortholog_one2one 1 retrogene
retro_mmul_879,
Monodelphis domestica ENSMODG00000011779 ortholog_one2one 1 retrogene
retro_mdom_358,
Nomascus leucogenys ENSNLEG00000008169 ortholog_one2one 1 retrogene
retro_nleu_933,
Pongo abelii ENSPPYG00000014867 ortholog_one2one 1 retrogene
retro_pabe_942,
Sus scrofa ENSSSCG00000008988 ortholog_one2one 1 retrogene
retro_sscr_813,
Ictidomys tridecemlineatus ENSSTOG00000027922 ortholog_one2one 1 retrogene
retro_itri_1112,
Tupaia belangeri ENSTBEG00000007671 ortholog_one2one 2 retrogenes
retro_tbel_2258, retro_tbel_38,
Tursiops truncatus ENSTTRG00000014837 ortholog_one2one 1 retrogene
retro_ttru_491,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_773 58.94 58.43
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Download FASTA sequences of all ENSPTRG00000016196 retrocopies