Parental gene:

RFK, ENSPTRG00000021036

Aliases:None
Description:Riboflavin kinase [Source:UniProtKB/TrEMBL;Acc:K7BEG2]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:9:74982103..74989106(-)


>ENSPTRG00000021036
AATTTTCCTGAGCAAGTGGTAGATAATCTTCCAGCTGATATATCCACTGGTATTTACTATGGTTGGGCCAGTGTTGGAAG
TGGAGATGTCCATAAGATGGTGGTGAGCATAGGATGGAACCCATATTACAAGAATACGAAGAAGTCTATGGAAACACATA
TCATGCATACCTTCAAAGAGGACTTCTATGGGGAAATCCTCAATGTGGCCATTGTTGGCTACCTGAGACCAGAAAAGAAC
TTTGATTCTTTAGAGTCACTTATTTCAGCAATTCAAGGTGATATTGAAGAAGCTAAGAAACGACTAGAGTTACCAGAACA
TTTGAAAATCAAAGAAGACAATTTCTTCCAGGTTTCTAAAAGCAAAATAATGAATGGCCACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 25 .52 RPM
SRP007412_cerebellum 16 .88 RPM
SRP007412_heart 11 .92 RPM
SRP007412_kidney 13 .73 RPM
SRP007412_liver 10 .31 RPM
SRP007412_testis 58 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003553 ortholog_one2one 1 retrogene
retro_amel_611,
Choloepus hoffmanni ENSCHOG00000009540 ortholog_one2one 35 retrogenes
retro_chof_1009, retro_chof_1035, retro_chof_1036, retro_chof_1399, retro_chof_1415, retro_chof_1426, retro_chof_1506, retro_chof_1743, retro_chof_1816, retro_chof_182, retro_chof_1898, retro_chof_2088, retro_chof_210, retro_chof_2122, retro_chof_2138, retro_chof_2139, retro_chof_218, retro_chof_2283, retro_chof_2307, retro_chof_2600, retro_chof_2651, retro_chof_2675, retro_chof_302, retro_chof_372, retro_chof_374, retro_chof_404, retro_chof_497, retro_chof_523, retro_chof_633, retro_chof_640, retro_chof_75, retro_chof_834, retro_chof_882, retro_chof_927, retro_chof_983,
Callithrix jacchus ENSCJAG00000031816 ortholog_one2one 3 retrogenes
retro_cjac_2553, retro_cjac_4032, retro_cjac_654,
Homo sapiens ENSG00000135002 ortholog_one2one 5 retrogenes
retro_hsap_2590, retro_hsap_2693, retro_hsap_2828, retro_hsap_305, retro_hsap_532,
Gorilla gorilla ENSGGOG00000010358 ortholog_one2one 1 retrogene
retro_ggor_339,
Macropus eugenii ENSMEUG00000000988 ortholog_one2one 6 retrogenes
retro_meug_1179, retro_meug_1815, retro_meug_1922, retro_meug_2144, retro_meug_268, retro_meug_698,
Monodelphis domestica ENSMODG00000001904 ortholog_one2many 2 retrogenes
retro_mdom_1404, retro_mdom_194,
Nomascus leucogenys ENSNLEG00000002051 ortholog_one2one 4 retrogenes
retro_nleu_1502, retro_nleu_1523, retro_nleu_1787, retro_nleu_2401,
Pongo abelii ENSPPYG00000019302 ortholog_one2one 5 retrogenes
retro_pabe_1224, retro_pabe_1622, retro_pabe_1763, retro_pabe_217, retro_pabe_2289,
Pteropus vampyrus ENSPVAG00000014032 ortholog_one2one 4 retrogenes
retro_pvam_1063, retro_pvam_255, retro_pvam_347, retro_pvam_951,
Sarcophilus harrisii ENSSHAG00000015887 ortholog_one2many 3 retrogenes
retro_shar_79, retro_shar_85, retro_shar_99,
Tursiops truncatus ENSTTRG00000014859 ortholog_one2one 4 retrogenes
retro_ttru_1624, retro_ttru_164, retro_ttru_1822, retro_ttru_95,
Vicugna pacos ENSVPAG00000002619 ortholog_one2one 1 retrogene
retro_vpac_360,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_246 79.83 92.91
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2. retro_ptro_398 79.28 87.40
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3. retro_ptro_1514 88.28 100.00
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Download FASTA sequences of all ENSPTRG00000021036 retrocopies