RetrogeneDB ID: | retro_meug_1922 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold72509:11693..11996(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RFK | ||
Ensembl ID: | ENSMEUG00000000988 | ||
Aliases: | None | ||
Description: | riboflavin kinase [Source:HGNC Symbol;Acc:30324] |
Percent Identity: | 66.99 % |
Parental protein coverage: | 84.87 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | VVRGFGRGSKQLGIPTANF-PDHVVDNLPSDFSTGIYYGWASVGNGDVHKMVLSIGWNPYYKNTKKSVET |
VV...GR.SKQLGIPTA.F.P..VV.NLPS..STGIYYGWA.V...DV.KMV.S.GWNP.YKNTKKS.ET | |
Retrocopy | VVK*GGRCSKQLGIPTATF<PGQVVENLPSHLSTGIYYGWATVAKADVQKMV*SLGWNPFYKNTKKSMET |
Parental | HIIH-TFKEDFYGEILSIVITGYIRPEKNFSSI |
.....TFKE.FY.EIL..V..GYIRPEK..SS. | |
Retrocopy | LVTY>TFKENFYAEILCRVMSGYIRPEKSLSSV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |