RetrogeneDB ID: | retro_chof_2675 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_96447:5670..6053(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RFK | ||
Ensembl ID: | ENSCHOG00000009540 | ||
Aliases: | None | ||
Description: | riboflavin kinase [Source:HGNC Symbol;Acc:30324] |
Percent Identity: | 84.5 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | NFPEQVVDNLPADISTGIYYGWASV-GSGDVHKMVVSIGWNPYYKNTKKSMETHIIHTFKEDFYGEMLNV |
.FPEQ.VDNLP.D.STGIYYGWA...GSGD.HKMVVS.GWNP.YKN.KKSME.HI..TFKEDF.GEMLNV | |
Retrocopy | DFPEQEVDNLPTDMSTGIYYGWAML<GSGDIHKMVVSRGWNPCYKNRKKSMEAHIMYTFKEDFFGEMLNV |
Parental | AIVGYIRPEKNFDSLESLISAIQGDIEEAKKQLELPEHLKLKEDNFFQVPKSKIMNGHC |
AIVGY.RPEKNF.SLESLISAIQGDIEEAKK.LELPEHLKLKEDNFFQVP.SKIMN.HC | |
Retrocopy | AIVGYLRPEKNFNSLESLISAIQGDIEEAKK*LELPEHLKLKEDNFFQVPNSKIMNSHC |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |