Parental gene:

NECAP1, ENSPTRG00000023277

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:12:8320201..8335415(+)


>ENSPTRG00000023277
ATGGCGACCGAGTTGGAGTACGAGTCCGTGCTGTGTGTGAAGCCAGACGTCAGCGTCTACCGGATTCCGCCCCGGGCCTC
CAACCGCGGTTACAGGGCCTCTGACTGGAAATTAGACCAGCCTGATTGGACTGGTCGCCTCCGAATCACTTCAAAAGGGA
AGACTGCCTATATCAAACTCGAGGATAAAGTTTCAGGGGAGCTCTTTGCTCAGGCACCAGTAGAACAATATCCTGGTATT
GCTGTGGAGACAGTGACAGATTCTAGCCGCTACTTTGTAATCCGGATCCAGGATGGTACTGGGCGCAGTGCTTTCATTGG
CATTGGCTTCACAGATCGGGGAGATGCCTTCGACTTTAATGTCTCCTTGCAGGATCACTTCAAGTGGGTAAAGCAGGAAT
CTGAGATTTCCAAGGAATCTCAAGAAATGGATGCTCGTCCTAAGTTGGATCTGGGCTTCAAGGAAGGACAAACCATCAAG
TTGAGTATCGGGAACATTACAAACAAGAAAGGAGGTGCTTCTAAGCCCAGGACTGCAAGGGGTGGGGGTCTGAGCCTACT
CCCACCCCCGCCAGGAGGCAAAGTCACTATTCCCCCACCATCCTCCTCAGTTGCCATCAGCAATCATGTCACCCCACCAC
CCATTCCGAAATCTAACCATGGAGGCAGTGATGCAGATATCCTTTTAGATTTGGATTCTCCTGCTCCTGTCACGACACCA
GCACCAACTCCAGTTTCTGCAAGCAATGACTTGTGGGGAGACTTCAGCACTGCATCCAGCTCTGTTCCAAACCAGGCACC
ACAGCCATCCAACTGGGTCCAGTTCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 96 .20 RPM
SRP007412_cerebellum 137 .12 RPM
SRP007412_heart 10 .35 RPM
SRP007412_kidney 27 .01 RPM
SRP007412_liver 23 .27 RPM
SRP007412_testis 44 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016989 ortholog_one2one 1 retrogene
retro_amel_1016,
Canis familiaris ENSCAFG00000013930 ortholog_one2one 1 retrogene
retro_cfam_780,
Choloepus hoffmanni ENSCHOG00000008087 ortholog_one2one 3 retrogenes
retro_chof_1692, retro_chof_1818, retro_chof_1913,
Dasypus novemcinctus ENSDNOG00000014778 ortholog_one2one 2 retrogenes
retro_dnov_613, retro_dnov_986,
Homo sapiens ENSG00000089818 ortholog_one2one 1 retrogene
retro_hsap_3839,
Gorilla gorilla ENSGGOG00000010233 ortholog_one2one 1 retrogene
retro_ggor_2585,
Loxodonta africana ENSLAFG00000002979 ortholog_one2one 1 retrogene
retro_lafr_632,
Mustela putorius furo ENSMPUG00000016742 ortholog_one2one 1 retrogene
retro_mputfur_361,
Nomascus leucogenys ENSNLEG00000001743 ortholog_one2one 1 retrogene
retro_nleu_1974,
Otolemur garnettii ENSOGAG00000006358 ortholog_one2one 1 retrogene
retro_ogar_3442,
Pongo abelii ENSPPYG00000004238 ortholog_one2one 1 retrogene
retro_pabe_3059,
Rattus norvegicus ENSRNOG00000009236 ortholog_one2one 1 retrogene
retro_rnor_1806,
Ictidomys tridecemlineatus ENSSTOG00000010153 ortholog_one2one 2 retrogenes
retro_itri_1107, retro_itri_740,
Tursiops truncatus ENSTTRG00000014260 ortholog_one2one 1 retrogene
retro_ttru_1035,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2615 87.00 100.00
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Download FASTA sequences of all ENSPTRG00000023277 retrocopies