Parental gene: | ENSPTRG00000028317 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | X:12899778..12902034(+) |
>ENSPTRG00000028317
AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGCGCGCCTCGCTCCGCTTTTCCTCCGCAACCATGTC
TGACAAACCCGATATGGCTGAGATCGAGAAATTCGATAAGTCGAAACTGAAGAAGACAGAGACGCAAGAGAAAAATCCAC
TGCCTTCCAAAGAAACAATTGAACAGGAGAAGCAAGCAGGCGAATCGTAA
AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGCGCGCCTCGCTCCGCTTTTCCTCCGCAACCATGTC
TGACAAACCCGATATGGCTGAGATCGAGAAATTCGATAAGTCGAAACTGAAGAAGACAGAGACGCAAGAGAAAAATCCAC
TGCCTTCCAAAGAAACAATTGAACAGGAGAAGCAAGCAGGCGAATCGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 302 .67 RPM |
| SRP007412_cerebellum | 63 .56 RPM |
| SRP007412_heart | 53 .28 RPM |
| SRP007412_kidney | 105 .68 RPM |
| SRP007412_liver | 82 .39 RPM |
| SRP007412_testis | 8 .01 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000038488 | possible_ortholog | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000006450 | ortholog_many2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000014256 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_77 | 98.55 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1440 | 94.20 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_1572 | 92.75 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_2864 | 95.65 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000028317 retrocopies