Parental gene:

PDPN, ENSPVAG00000011180

Aliases:None
Description:podoplanin [Source:HGNC Symbol;Acc:29602]
Organism:Megabat (Pteropus vampyrus)
Coordinates:scaffold_6109:58419..82862(-)


>ENSPVAG00000011180
ATGCTGACTCCACTCCCAAAGTTCCCAGCTGCGAAGTTTGCTTTTCGGCTGGCGGCGAAGGAAGCTTGGGGACCCTCCCG
CGCTGGGACTTTTGCTCCCTGCATTCCAGCCCCCCTTTCGCGCTCCGCCAAGCAGGGCCTGTGGCTGCAGTTTTTCATCT
CGCCCCAGCACAGAAACCTGTTCAAAGAGAGCGAGTTAACCGAGAAGATGTGGAAGGTGCCGGTTCTGCTGTTGGTTTTG
GGAAGAGCATCGCTCTGGTTTTTGGCAGAAGGAGCCATCACAGTCCGGCCAGAAGATGACATTAGAACTCAAGGTGTGGA
AGATGGCATGGTGACCCCAGGTGCCAGTGAAGATCCCTATCAGTCTGTTGACTGGACAGCTTTGGTGCCCACAAGTACAA
AGAGCACAGTCACACGTATAGAGGACCTGCCAACCTCAGAAAGCACAGTCCATGCCCAAGAAGAAAGCCAGAGCACCACA
GCCTCGAATATGGCCACTAGTCACTCCATGGGAGACACACAAACAACAATTGAGAAAGATGGCTTGGCGACAGGCACCCT
GATTGGAATCACTGTCGGGGTCTTACTAGCCATCGGATTCATTGGTGGGATCATCATTGTGGTTGTGCGAAAAATGTCGG
GAAGGTACTCGCCCTAA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007003 ortholog_one2one 3 retrogenes
retro_chof_1612, retro_chof_2419, retro_chof_583,
Callithrix jacchus ENSCJAG00000013772 ortholog_one2one 1 retrogene
retro_cjac_1300,
Mus musculus ENSMUSG00000028583 ortholog_one2one 1 retrogene
retro_mmus_774,
Tarsius syrichta ENSTSYG00000005667 ortholog_one2one 1 retrogene
retro_tsyr_1571,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_1402 70.09 53.21
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Download FASTA sequences of all ENSPVAG00000011180 retrocopies