Parental gene: | Rchy1, ENSRNOG00000002546 |
| Aliases: | None |
| Description: | RING finger and CHY zinc finger domain-containing protein 1 [Source:RefSeq peptide;Acc:NP_001007619] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 14:17533356..17548693(+) |
>ENSRNOG00000002546
ATGGCGGCGACGGCGCAGGAAGATGGCGTCCGCAGCCCGGCTCCAGGGCCGCGGGGTTGCGAGCACTATGACAGAGCCTG
TCTCCTCAAGGCACCTTGTTGTGACAAGCTCTATACATGCCGGCTATGTCACGACACCCACGAAGATCATCAGCTGGACC
GCTTCAAAGTAAAGGAAGTGCAGTGCATCAACTGTGAAAAACTCCAGCATGCCCAGCAGACTTGTGAGGACTGCAGCACA
CTGTTTGGAGAATATTACTGCAGTATTTGCCACCTGTTTGACAAAGACAAGAAGCAGTATCACTGTGAGAGCTGTGGGAT
TTGTAGGATTGGTCCAAAGGAAGATTTTTTTCATTGCTTGAAATGTAACTTATGCCTAGCCATGACTCTTCGAGGAAAAC
ACAAGTGTATTGAAAATGTTTCCCGGCAGAATTGTCCAATATGCTTGGAGGACATTCATACCTCCCGTGTCGTTGCTCAT
GTCTTGCCATGCGGGCATCTCCTACATAGAACGTGTTATGAAGAAATGTTGAAAGAAGGTTACAGATGCCCATTGTGTAT
GCATTCTGCCCTAGACATGACTCGGTACTGGAGACAATTAGACATTGAGGTAGCACAGACTCCTATGCCATCCGAATACC
AGAACGTGACCGTTGATATTCTCTGCAATGACTGTAATGGACGATCCACAGTCCAGTTCCATATCTTAGGCATGAAATGT
AAGCTTTGTGACTCCTACAATACTGCTCAGGCTGGAGGCCGCACAGTGTCCATGGATGAGCAGTGA
ATGGCGGCGACGGCGCAGGAAGATGGCGTCCGCAGCCCGGCTCCAGGGCCGCGGGGTTGCGAGCACTATGACAGAGCCTG
TCTCCTCAAGGCACCTTGTTGTGACAAGCTCTATACATGCCGGCTATGTCACGACACCCACGAAGATCATCAGCTGGACC
GCTTCAAAGTAAAGGAAGTGCAGTGCATCAACTGTGAAAAACTCCAGCATGCCCAGCAGACTTGTGAGGACTGCAGCACA
CTGTTTGGAGAATATTACTGCAGTATTTGCCACCTGTTTGACAAAGACAAGAAGCAGTATCACTGTGAGAGCTGTGGGAT
TTGTAGGATTGGTCCAAAGGAAGATTTTTTTCATTGCTTGAAATGTAACTTATGCCTAGCCATGACTCTTCGAGGAAAAC
ACAAGTGTATTGAAAATGTTTCCCGGCAGAATTGTCCAATATGCTTGGAGGACATTCATACCTCCCGTGTCGTTGCTCAT
GTCTTGCCATGCGGGCATCTCCTACATAGAACGTGTTATGAAGAAATGTTGAAAGAAGGTTACAGATGCCCATTGTGTAT
GCATTCTGCCCTAGACATGACTCGGTACTGGAGACAATTAGACATTGAGGTAGCACAGACTCCTATGCCATCCGAATACC
AGAACGTGACCGTTGATATTCTCTGCAATGACTGTAATGGACGATCCACAGTCCAGTTCCATATCTTAGGCATGAAATGT
AAGCTTTGTGACTCCTACAATACTGCTCAGGCTGGAGGCCGCACAGTGTCCATGGATGAGCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 13 .58 RPM |
| SRP017611_kidney | 31 .12 RPM |
| SRP017611_brain | 22 .29 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000032536 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000011650 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000003266 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000019197 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000013786 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_607 | 76.00 | 57.09 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1127 | 85.52 | 55.17 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000002546 retrocopies