Parental gene: | Nono, ENSRNOG00000003689 |
| Aliases: | None |
| Description: | Non-POU domain-containing octamer-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q5FVM4] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | X:72175056..72192917(+) |
>ENSRNOG00000003689
ATGCAGAGCAATAAAACCTTTAACTTGGAGAAGCAGAATCATACTCCAAGGAAGCACCATCAGCATCACCACCAGCAGCA
CCATCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCACCCCCACCAATACCTGCAAATGGACAGCAGGCCA
GCAGCCAGAATGAAGGCTTGACTATTGACCTGAAGAATTTTAGGAAACCAGGAGAGAAGACCTTTACCCAACGTAGCCGT
CTCTTTGTGGGCAATCTTCCCCCTGACATCACTGAGGAGGAAATGAGGAAACTTTTTGAGAAATATGGGAAAGCAGGCGA
AGTTTTCATTCATAAGGATAAAGGCTTTGGCTTTATTCGCTTGGAAACACGAACCCTAGCGGAAATTGCCAAAGTGGAGC
TGGACAACATGCCACTCCGTGGAAAGCAGCTGCGAGTGCGCTTTGCTTGTCATAGTGCATCCCTTACGGTTCGCAACCTT
CCTCAGTACGTGTCCAACGAACTGCTGGAAGAAGCCTTTTCTGTGTTTGGCCAGGTGGAGAGGGCTGTAGTCATTGTGGA
TGACCGAGGAAGGCCCTCGGGGAAAGGCATTGTTGAGTTCTCAGGGAAGCCAGCTGCTCGGAAAGCTCTGGACAGATGCA
GTGAAGGCTCCTTCTTGCTAACCACATTTCCTCGGCCTGTGACTGTGGAGCCTATGGACCAGTTAGATGATGAAGAGGGA
CTTCCGGAGAAGTTGGTTATAAAAAACCAGCAATTTCACAAGGAGAGAGAACAGCCACCCAGATTTGCACAGCCTGGGTC
CTTTGAGTATGAGTATGCCATGCGCTGGAAGGCTCTCATTGAGATGGAGAAGCAACAGCAGGATCAAGTGGACCGAAACA
TCAAGGAGGCTCGTGAGAAGCTGGAGATGGAGATGGAGGCAGCACGCCATGAGCACCAGGTTATGCTAATGAGGCAGGAT
TTGATGAGACGTCAAGAAGAGCTTCGAAGAATGGAGGAGCTGCATAACCAAGAGGTTCAGAAACGAAAGCAGTTAGAACT
CAGGCAGGAAGAGGAACGCAGGCGCCGTGAGGAAGAGATGCGGCGACAGCAAGAAGAAATGATGCGACGGCAGCAGGAAG
GATTCAAGGGAACCTTCCCTGATGCGAGAGAACAAGAGATACGGATGGGCCAAATGGCTATGGGAGGTGCCATGGGCATA
AACAATAGAGGCGCCATGCCCCCTGCTCCTGTGCCACCTGGTACTCCAGCTCCTCCAGGACCTGCTGCTATGATGCCAGA
TGGAACCCTTGGATTGACTCCACCAACAACTGAACGTTTTGGCCAAGCTGCTACAATGGAAGGAATTGGAGCAATTGGTG
GAACTCCTCCTGCATTCAACCGTCCAGCTCCTGGAGCTGAATTTGCTCCAAATAAACGCCGCCGATATTAG
ATGCAGAGCAATAAAACCTTTAACTTGGAGAAGCAGAATCATACTCCAAGGAAGCACCATCAGCATCACCACCAGCAGCA
CCATCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCACCCCCACCAATACCTGCAAATGGACAGCAGGCCA
GCAGCCAGAATGAAGGCTTGACTATTGACCTGAAGAATTTTAGGAAACCAGGAGAGAAGACCTTTACCCAACGTAGCCGT
CTCTTTGTGGGCAATCTTCCCCCTGACATCACTGAGGAGGAAATGAGGAAACTTTTTGAGAAATATGGGAAAGCAGGCGA
AGTTTTCATTCATAAGGATAAAGGCTTTGGCTTTATTCGCTTGGAAACACGAACCCTAGCGGAAATTGCCAAAGTGGAGC
TGGACAACATGCCACTCCGTGGAAAGCAGCTGCGAGTGCGCTTTGCTTGTCATAGTGCATCCCTTACGGTTCGCAACCTT
CCTCAGTACGTGTCCAACGAACTGCTGGAAGAAGCCTTTTCTGTGTTTGGCCAGGTGGAGAGGGCTGTAGTCATTGTGGA
TGACCGAGGAAGGCCCTCGGGGAAAGGCATTGTTGAGTTCTCAGGGAAGCCAGCTGCTCGGAAAGCTCTGGACAGATGCA
GTGAAGGCTCCTTCTTGCTAACCACATTTCCTCGGCCTGTGACTGTGGAGCCTATGGACCAGTTAGATGATGAAGAGGGA
CTTCCGGAGAAGTTGGTTATAAAAAACCAGCAATTTCACAAGGAGAGAGAACAGCCACCCAGATTTGCACAGCCTGGGTC
CTTTGAGTATGAGTATGCCATGCGCTGGAAGGCTCTCATTGAGATGGAGAAGCAACAGCAGGATCAAGTGGACCGAAACA
TCAAGGAGGCTCGTGAGAAGCTGGAGATGGAGATGGAGGCAGCACGCCATGAGCACCAGGTTATGCTAATGAGGCAGGAT
TTGATGAGACGTCAAGAAGAGCTTCGAAGAATGGAGGAGCTGCATAACCAAGAGGTTCAGAAACGAAAGCAGTTAGAACT
CAGGCAGGAAGAGGAACGCAGGCGCCGTGAGGAAGAGATGCGGCGACAGCAAGAAGAAATGATGCGACGGCAGCAGGAAG
GATTCAAGGGAACCTTCCCTGATGCGAGAGAACAAGAGATACGGATGGGCCAAATGGCTATGGGAGGTGCCATGGGCATA
AACAATAGAGGCGCCATGCCCCCTGCTCCTGTGCCACCTGGTACTCCAGCTCCTCCAGGACCTGCTGCTATGATGCCAGA
TGGAACCCTTGGATTGACTCCACCAACAACTGAACGTTTTGGCCAAGCTGCTACAATGGAAGGAATTGGAGCAATTGGTG
GAACTCCTCCTGCATTCAACCGTCCAGCTCCTGGAGCTGAATTTGCTCCAAATAAACGCCGCCGATATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 55 .00 RPM |
| SRP017611_kidney | 128 .05 RPM |
| SRP017611_brain | 105 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000016057 | ortholog_one2one | 2 retrogenes | |
| Bos taurus | ENSBTAG00000012152 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000017071 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000036744 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000008502 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000014807 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000147140 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000006194 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000000232 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000002489 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000004937 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000031311 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000001278 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000021848 | possible_ortholog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000004834 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000020451 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000022010 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000016503 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000007959 | ortholog_one2one | 2 retrogenes | |
| Drosophila melanogaster | FBgn0004227 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1178 | 70.52 | 72.06 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1503 | 90.00 | 58.40 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000003689 retrocopies