Parental gene:

Nono, ENSRNOG00000003689

Aliases:None
Description:Non-POU domain-containing octamer-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q5FVM4]
Organism:Rat (Rattus norvegicus)
Coordinates:X:72175056..72192917(+)


>ENSRNOG00000003689
ATGCAGAGCAATAAAACCTTTAACTTGGAGAAGCAGAATCATACTCCAAGGAAGCACCATCAGCATCACCACCAGCAGCA
CCATCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCACCCCCACCAATACCTGCAAATGGACAGCAGGCCA
GCAGCCAGAATGAAGGCTTGACTATTGACCTGAAGAATTTTAGGAAACCAGGAGAGAAGACCTTTACCCAACGTAGCCGT
CTCTTTGTGGGCAATCTTCCCCCTGACATCACTGAGGAGGAAATGAGGAAACTTTTTGAGAAATATGGGAAAGCAGGCGA
AGTTTTCATTCATAAGGATAAAGGCTTTGGCTTTATTCGCTTGGAAACACGAACCCTAGCGGAAATTGCCAAAGTGGAGC
TGGACAACATGCCACTCCGTGGAAAGCAGCTGCGAGTGCGCTTTGCTTGTCATAGTGCATCCCTTACGGTTCGCAACCTT
CCTCAGTACGTGTCCAACGAACTGCTGGAAGAAGCCTTTTCTGTGTTTGGCCAGGTGGAGAGGGCTGTAGTCATTGTGGA
TGACCGAGGAAGGCCCTCGGGGAAAGGCATTGTTGAGTTCTCAGGGAAGCCAGCTGCTCGGAAAGCTCTGGACAGATGCA
GTGAAGGCTCCTTCTTGCTAACCACATTTCCTCGGCCTGTGACTGTGGAGCCTATGGACCAGTTAGATGATGAAGAGGGA
CTTCCGGAGAAGTTGGTTATAAAAAACCAGCAATTTCACAAGGAGAGAGAACAGCCACCCAGATTTGCACAGCCTGGGTC
CTTTGAGTATGAGTATGCCATGCGCTGGAAGGCTCTCATTGAGATGGAGAAGCAACAGCAGGATCAAGTGGACCGAAACA
TCAAGGAGGCTCGTGAGAAGCTGGAGATGGAGATGGAGGCAGCACGCCATGAGCACCAGGTTATGCTAATGAGGCAGGAT
TTGATGAGACGTCAAGAAGAGCTTCGAAGAATGGAGGAGCTGCATAACCAAGAGGTTCAGAAACGAAAGCAGTTAGAACT
CAGGCAGGAAGAGGAACGCAGGCGCCGTGAGGAAGAGATGCGGCGACAGCAAGAAGAAATGATGCGACGGCAGCAGGAAG
GATTCAAGGGAACCTTCCCTGATGCGAGAGAACAAGAGATACGGATGGGCCAAATGGCTATGGGAGGTGCCATGGGCATA
AACAATAGAGGCGCCATGCCCCCTGCTCCTGTGCCACCTGGTACTCCAGCTCCTCCAGGACCTGCTGCTATGATGCCAGA
TGGAACCCTTGGATTGACTCCACCAACAACTGAACGTTTTGGCCAAGCTGCTACAATGGAAGGAATTGGAGCAATTGGTG
GAACTCCTCCTGCATTCAACCGTCCAGCTCCTGGAGCTGAATTTGCTCCAAATAAACGCCGCCGATATTAG

Library Parental gene expression (RPM)
SRP017611_brain 105 .11 RPM
SRP017611_kidney 128 .05 RPM
SRP017611_liver 55 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016057 ortholog_one2one 2 retrogenes
retro_amel_1438, retro_amel_795,
Bos taurus ENSBTAG00000012152 ortholog_one2one 2 retrogenes
retro_btau_1027, retro_btau_313,
Canis familiaris ENSCAFG00000017071 ortholog_one2many 1 retrogene
retro_cfam_98,
Callithrix jacchus ENSCJAG00000036744 ortholog_one2many 1 retrogene
retro_cjac_3990,
Equus caballus ENSECAG00000008502 ortholog_one2one 2 retrogenes
retro_ecab_357, retro_ecab_427,
Felis catus ENSFCAG00000014807 ortholog_one2one 2 retrogenes
retro_fcat_1219, retro_fcat_147,
Homo sapiens ENSG00000147140 ortholog_one2one 1 retrogene
retro_hsap_1699,
Gorilla gorilla ENSGGOG00000006194 ortholog_one2one 1 retrogene
retro_ggor_1273,
Microcebus murinus ENSMICG00000000232 ortholog_one2one 1 retrogene
retro_mmur_569,
Myotis lucifugus ENSMLUG00000002489 ortholog_one2one 1 retrogene
retro_mluc_622,
Mustela putorius furo ENSMPUG00000004937 ortholog_one2one 1 retrogene
retro_mputfur_937,
Mus musculus ENSMUSG00000031311 ortholog_one2one 2 retrogenes
retro_mmus_3652, retro_mmus_632,
Nomascus leucogenys ENSNLEG00000001278 ortholog_one2one 1 retrogene
retro_nleu_1344,
Oryctolagus cuniculus ENSOCUG00000021848 possible_ortholog 2 retrogenes
retro_ocun_1317, retro_ocun_1804,
Otolemur garnettii ENSOGAG00000004834 ortholog_one2one 3 retrogenes
retro_ogar_1525, retro_ogar_546, retro_ogar_593,
Pongo abelii ENSPPYG00000020451 ortholog_one2one 1 retrogene
retro_pabe_1398,
Pan troglodytes ENSPTRG00000022010 ortholog_one2one 1 retrogene
retro_ptro_1150,
Pteropus vampyrus ENSPVAG00000016503 ortholog_one2one 1 retrogene
retro_pvam_444,
Sorex araneus ENSSARG00000007959 ortholog_one2one 2 retrogenes
retro_sara_661, retro_sara_663,
Drosophila melanogaster FBgn0004227 ortholog_many2many 1 retrogene
retro_dmel_11,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1178 70.52 72.06
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2. retro_rnor_1503 90.00 58.40
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Download FASTA sequences of all ENSRNOG00000003689 retrocopies