Parental gene: | Trnt1, ENSRNOG00000006432 |
| Aliases: | None |
| Description: | tRNA-nucleotidyltransferase 1, mitochondrial [Source:RefSeq peptide;Acc:NP_001019432] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 4:203326022..203339605(+) |
>ENSRNOG00000006432
ATGCAGAGCCTCTTGTACCCTTGGCACAGGCAGGTCCTGAGCTGTAGTTGGAGTAGATTGTGCCTTCTAAAGCGATACCT
ATTTACAATGAAGTTGCAGTCTCCAGAATTCCAGTCACTTTTCACAGAAGGATTGAAGAGCCTGACAGAATTATTTGCCA
AAGAGAATCATGAATTAAGAATAGCAGGAGGGGCGGTGAGAGATTTACTAAATGGGGTGAAGCCTCAGGATGTGGATTTC
GCCACCACTGCCACCCCTACTGAGATGAAGGAGATGTTCCAGGCGGCTGGCATTCGCATGATAAACAACAAAGGCGAGAA
GCATGGGACCATCACTGCCAGGCTTCATGAAGAAAATTTTGAGGTTACTACACTCCGGATTGATGTTAGCACTGACGGAA
GACATGCGGAGGTAGAGTTCACTGACTGGCAGAAGGATGCCGAACGAAGAGACCTCACTATAAACTCCATGTTTCTAGGT
TTTGATGGTACACTGTTTGATTACTTTAATGGTTATGCAGATTTAAAGAATAAAAAGGTTCGATTTGTTGGACACGCTAA
GCAGAGAATTCAGGAAGATTATCTTCGAATTTTAAGGTATTTCAGATTTTATGGCAGAATTGTCGACAAACCCGGTGACC
ATGACCGTGAGACTCTAGAAGCAATTGCAGAAAATGCCAAAGGCTTGGCTGGAATATCAGGAGAGAGGATTTGGGTAGAA
CTGAAGAAAATTCTTACTGGTGACCATGTAAACCATTTGATCCACCTGATCTATGATCTTGATGTGGCTTCTCACATAGG
TTTACCTGCTAATGCAAATTTAGAAGAATTTAACAAAGTCAGTAAAAATGTTGAAGGCTTTTCACCGAAACCAATGACTG
TTTTGGCCTCTTTATTCAAAGTACAAGATGATGTCACAAAACTGGATTTGAGATTGAAAATTTCAAAAGAGGAGAAAAAT
CTGGGTTTATTTATAGTTAAAAACAGGAAAGATTTGATTAAAGCAACAGATAGTTCAGAACCATTGAAACCATATCAAGA
CTTTGTTATAGATTCTAGGGAACCGGATGCAACTGCCCGTGTTTGTGAGCTGCTGAAGTACCAAGGAGAGCATGCTCTTC
TCAAGGAGATGCAGCAGTGGTCTGTGCCGCCATTCCCTGTGAGTGGACACGACATCAGAAAAGTGGGCATTTCTTCAGGG
AAGGAAATTGGGGCCCTGTTACAGCAGTTGCGTGAACAGTGGAAGAAAAGTGGTTACCAAATGGAAAAAGATGAACTACT
AAGTTACATAAAGAAGACATAA
ATGCAGAGCCTCTTGTACCCTTGGCACAGGCAGGTCCTGAGCTGTAGTTGGAGTAGATTGTGCCTTCTAAAGCGATACCT
ATTTACAATGAAGTTGCAGTCTCCAGAATTCCAGTCACTTTTCACAGAAGGATTGAAGAGCCTGACAGAATTATTTGCCA
AAGAGAATCATGAATTAAGAATAGCAGGAGGGGCGGTGAGAGATTTACTAAATGGGGTGAAGCCTCAGGATGTGGATTTC
GCCACCACTGCCACCCCTACTGAGATGAAGGAGATGTTCCAGGCGGCTGGCATTCGCATGATAAACAACAAAGGCGAGAA
GCATGGGACCATCACTGCCAGGCTTCATGAAGAAAATTTTGAGGTTACTACACTCCGGATTGATGTTAGCACTGACGGAA
GACATGCGGAGGTAGAGTTCACTGACTGGCAGAAGGATGCCGAACGAAGAGACCTCACTATAAACTCCATGTTTCTAGGT
TTTGATGGTACACTGTTTGATTACTTTAATGGTTATGCAGATTTAAAGAATAAAAAGGTTCGATTTGTTGGACACGCTAA
GCAGAGAATTCAGGAAGATTATCTTCGAATTTTAAGGTATTTCAGATTTTATGGCAGAATTGTCGACAAACCCGGTGACC
ATGACCGTGAGACTCTAGAAGCAATTGCAGAAAATGCCAAAGGCTTGGCTGGAATATCAGGAGAGAGGATTTGGGTAGAA
CTGAAGAAAATTCTTACTGGTGACCATGTAAACCATTTGATCCACCTGATCTATGATCTTGATGTGGCTTCTCACATAGG
TTTACCTGCTAATGCAAATTTAGAAGAATTTAACAAAGTCAGTAAAAATGTTGAAGGCTTTTCACCGAAACCAATGACTG
TTTTGGCCTCTTTATTCAAAGTACAAGATGATGTCACAAAACTGGATTTGAGATTGAAAATTTCAAAAGAGGAGAAAAAT
CTGGGTTTATTTATAGTTAAAAACAGGAAAGATTTGATTAAAGCAACAGATAGTTCAGAACCATTGAAACCATATCAAGA
CTTTGTTATAGATTCTAGGGAACCGGATGCAACTGCCCGTGTTTGTGAGCTGCTGAAGTACCAAGGAGAGCATGCTCTTC
TCAAGGAGATGCAGCAGTGGTCTGTGCCGCCATTCCCTGTGAGTGGACACGACATCAGAAAAGTGGGCATTTCTTCAGGG
AAGGAAATTGGGGCCCTGTTACAGCAGTTGCGTGAACAGTGGAAGAAAAGTGGTTACCAAATGGAAAAAGATGAACTACT
AAGTTACATAAAGAAGACATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 10 .22 RPM |
| SRP017611_kidney | 19 .05 RPM |
| SRP017611_brain | 19 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dipodomys ordii | ENSDORG00000014035 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000018177 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015286 | possible_ortholog | 1 retrogene | |
| Petromyzon marinus | ENSPMAG00000002236 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_512 | 99.31 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000006432 retrocopies