Parental gene:

TRNT1, ENSGGOG00000015286

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:3:3249231..3272762(+)


>ENSGGOG00000015286
ATGCTGAGGTGCCTGTATCATTGGCACAGGCCAGTGCTGAACCGTAGGTGGAGTAGGCTGTGCCTTCTGAAGCAGTATCT
ATTTACAATGAAGTTGCAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGATTGAAGAGTCTGACAGAATTATTTGTCA
AAGAGAATCACGAATTAAGAATAGCAGGAGGAGCAGTGAGGGATTTATTAAATGGAGTAAAGCCTCAGGATATAGATTTT
GCCACCACTGCTACCCCTACTCAAATGAAGGATATGTTTCAGTCGGCTGGGATTCGGATGATAAACAACAGAGGAGAAAA
GCACGGAACAATTACTGCCAGGCTTCATGAAGAAAATTTTGAGATTACTACACTACGGATTGATGTCACCACTGATGGAA
GACATGCTGAGGTAGAATTTACAACTGACTGGCAGAAAGATGCGGAACGCAGAGATCTCACTATAAATTCTATGTTTTTA
GGTTTTGATGGCACTTTATTTGACTACTTTAATGGTTATGAAGATTTAAAAAATAAGAAAGTTAGATTTGTTGGACATGC
TAAACAGAGAATACAAGAGGATTATCTTAGAATTTTAAGATACTTCAGGTTTTATGGGAGAATTGTAGACAAACCTGGTG
ACCATGATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCAAAAGGCTTGGCTGGAATATCAGGAGAAAGGATTTGGGTG
GAACTGAAAAAAATTCTTGTTGGTAACCATGTAAATCATTTGATTCACCTTATCTATGATCTTGATGTGGCTCCTTATAT
AGGTTTACCTGCTAATGCAAGTTTAGAAGAATTTGACAAAGTCAGTAAAAATGTTGATGGTTTTTCACCAAAGCCAATGA
CTCTTTTGGCCTCATTATTCAAAGTACAAGATGATGTCACAAAATTGGATTTGAGGTTGAAGATCGCAAAAGAGGAGAAA
AACCTTGGCTTATTTATAGTTAAAAATAGGAAAGATTTAATTAAAGCAACAGATAGTTCAGACCCATTGAAACCCTATCA
AGACTTCATTATAGATTCTAGGGAACCTGATGCAACTACTCGTGTATGTGAACTACTGAAGTACCAAGGAGAGCACTGTC
TCCTAAAGGAAATGCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCA
GGAAAAGAAATTGGGGCTCTATTACAACAGTTGCGAGAACAGTGGAAAAAAAGTGGTTACCAAATGGAAAAAGATGAACT
TCTGAGTTACATAAAGAAGACCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 5 .71 RPM
SRP007412_cerebellum 5 .20 RPM
SRP007412_heart 1 .38 RPM
SRP007412_kidney 8 .46 RPM
SRP007412_liver 4 .70 RPM
SRP007412_testis 14 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015466 ortholog_one2one 1 retrogene
retro_cjac_1512,
Dasypus novemcinctus ENSDNOG00000008837 ortholog_one2many 1 retrogene
retro_dnov_1635,
Dipodomys ordii ENSDORG00000014035 possible_ortholog 1 retrogene
retro_dord_414,
Echinops telfairi ENSETEG00000018177 ortholog_one2many 2 retrogenes
retro_etel_1871, retro_etel_905,
Homo sapiens ENSG00000072756 ortholog_one2one 2 retrogenes
retro_hsap_246, retro_hsap_2598,
Nomascus leucogenys ENSNLEG00000003226 ortholog_one2one 1 retrogene
retro_nleu_856,
Petromyzon marinus ENSPMAG00000002236 ortholog_one2many 1 retrogene
retro_pmar_17,
Pongo abelii ENSPPYG00000013702 ortholog_one2one 3 retrogenes
retro_pabe_1916, retro_pabe_2721, retro_pabe_412,
Pan troglodytes ENSPTRG00000014564 ortholog_one2one 1 retrogene
retro_ptro_1522,
Rattus norvegicus ENSRNOG00000006432 possible_ortholog 1 retrogene
retro_rnor_512,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_300 76.23 50.69
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Download FASTA sequences of all ENSGGOG00000015286 retrocopies