Parental gene:

Apex1, ENSRNOG00000009663

Aliases:Apex1, APE, Apex, REF-1
Description:DNA-(apurinic or apyrimidinic site) lyase DNA-(apurinic or apyrimidinic site) lyase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P43138]
Organism:Rat (Rattus norvegicus)
Coordinates:15:31682395..31684507(+)


>ENSRNOG00000009663
ATGCCGAAGCGGGGGAAGAGAGCGGCAGCGGAAGACGGGGAAGAACCCAAGTCCGAGCCAGAGACCAAGAAGAGTAAGGG
GGCAGCAAAGAAAACTGAGAAGGAGGCCGCAGGAGAGGGCCCTGTCCTGTATGAGGACCCTCCAGATCAGAAAACGTCAG
CCAGTGGCAAATCTGCCACACTCAAGATATGCTCCTGGAATGTGGATGGGCTTCGAGCCTGGATTAAAAAGAAAGGCTTG
GATTGGGTAAAGGAAGAAGCACCAGACATCTTGTGCCTCCAAGAGACCAAATGCTCAGAGAACAAACTCCCGGCTGAACT
GCAAGAGCTGCCTGGACTCACCCATCAGTACTGGTCAGCTCCATCAGACAAAGAAGGATATAGTGGTGTGGGCCTACTTT
CCCGCCAATGCCCGCTCAAAGTCTCTTATGGCATTGGTGAGGAAGAACATGATCAAGAAGGCCGGGTGATTGTGGCTGAA
TTTGAGTCCTTTATCTTGGTAACAGCCTATGTTCCGAACGCAGGAAGGGGTCTGGTAAGACTGGAGTACCGACAGCGATG
GGATGAAGCCTTCAGAAAGTTTCTAAAGGACTTGGCTTCCCGGAAACCTCTTGTGCTGTGTGGGGATCTCAATGTGGCTC
ATGAAGAAATAGACCTTCGTAACCCCAAAGGAAACAAAAAGAATGCTGGTTTTACTCCCCAGGAGCGCCAAGGCTTTGGG
GAAATGCTACAGGCTGTACCACTGGCTGACAGCTTCCGGCATCTCTACCCCAACACTGCCTACGCTTATACTTTCTGGAC
TTACATGATGAATGCCCGCTCTAAGAATGTTGGTTGGCGCCTTGATTACTTTTTGCTGTCTCACTCTCTTTTACCTGCTT
TGTGCGACAGCAAGATCCGGTCCAAGGCTCTTGGCAGTGACCACTGTCCCATCACCCTTTACCTAGCACTGTGA

Library Parental gene expression (RPM)
SRP017611_brain 33 .29 RPM
SRP017611_kidney 31 .96 RPM
SRP017611_liver 7 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002745 ortholog_one2one 1 retrogene
retro_btau_1729,
Echinops telfairi ENSETEG00000004855 ortholog_one2many 1 retrogene
retro_etel_1392,
Loxodonta africana ENSLAFG00000021872 ortholog_one2one 1 retrogene
retro_lafr_948,
Mus musculus ENSMUSG00000035960 ortholog_one2one 2 retrogenes
retro_mmus_2027, retro_mmus_433,
Otolemur garnettii ENSOGAG00000013335 ortholog_one2many 3 retrogenes
retro_ogar_1284, retro_ogar_2145, retro_ogar_3243,
Rattus norvegicus ENSRNOG00000000166 within_species_paralog 1 retrogene
retro_rnor_1061,
Ictidomys tridecemlineatus ENSSTOG00000010096 ortholog_one2one 1 retrogene
retro_itri_1560,
Tupaia belangeri ENSTBEG00000006405 ortholog_one2one 1 retrogene
retro_tbel_3409,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2971 68.33 93.38
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Download FASTA sequences of all ENSRNOG00000009663 retrocopies