Parental gene: | Sec13, ENSRNOG00000010628 |
| Aliases: | Sec13, Sec13l1 |
| Description: | None |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 4:208982589..208995976(-) |
>ENSRNOG00000010628
ATGGTGTCAGTAATTAACACTGTGGATACCTCTCATGAGGACATGATTCATGATGCGCAGATGGACTATTATGGCACCCG
CCTAGCAACCTGCTCCTCAGATAGGTCTGTCAAAATTTTTGATGTGCGAAATGGAGGGCAGATCCTCATCGCAGACCTCA
GAGGACATGAGGGGCCAGTGTGGCAGGTGGCCTGGGCTCACCCCATGTATGGCAATATCCTGGCTTCCTGTTCCTATGAC
CGGAAAGTCATTATCTGGAAGGAGGAAAATGGCACTTGGGAAAAGACCCATGAGCACTCAGGACATGACTCCTCAGTGAA
CTCTGTTTGCTGGGCCCCTCATGACTATGGCCTGATCCTGGCCTGTGGGAGTTCAGATGGTGCCATCTCGCTGCTGACTT
ATACAGGGGAAGGCCAGTGGGAAGTGAAGAAGATTAACAATGCTCACACGATTGGCTGTAATGCTGTCAGTTGGGCCCCA
GCTGTTGTGCCTGGAAGCCTTATAGACCAACCATCCGGACAGAAACCCAATTACATCAAGAAGTTTGCATCAGGTGGCTG
TGACAATCTCATCAAGTTGTGGAGGGAAGAGGAGGATGGCCAGTGGAAGGAGGAGCAAAAGCTAGAGGCACACAGTGACT
GGGTTCGAGACGTTGCCTGGGCCCCCTCCATTGGCTTGCCCACCAGCACCATTGCCAGCTGCTCTCAGGATGGGCGAGTG
TTTATTTGGACTTGTGATGACGCCTCAGGCAATATGTGGTCACCTAAACTCCTACACAAGTTCAATGATGTCGTGTGGCA
CGTGAGCTGGTCCATCACAGCAAATATCCTGGCTGTGTCAGGTGGAGACAATAAGGTGACCCTGTGGAAAGAGTCGGTGG
ATGGACAGTGGGTGTGCATCAGTGATGTCAACAAGGGCCAGGGTTCTGTGTCAGCCTCCATCACAGAGGGCCAACAGAAT
GAGCAATGA
ATGGTGTCAGTAATTAACACTGTGGATACCTCTCATGAGGACATGATTCATGATGCGCAGATGGACTATTATGGCACCCG
CCTAGCAACCTGCTCCTCAGATAGGTCTGTCAAAATTTTTGATGTGCGAAATGGAGGGCAGATCCTCATCGCAGACCTCA
GAGGACATGAGGGGCCAGTGTGGCAGGTGGCCTGGGCTCACCCCATGTATGGCAATATCCTGGCTTCCTGTTCCTATGAC
CGGAAAGTCATTATCTGGAAGGAGGAAAATGGCACTTGGGAAAAGACCCATGAGCACTCAGGACATGACTCCTCAGTGAA
CTCTGTTTGCTGGGCCCCTCATGACTATGGCCTGATCCTGGCCTGTGGGAGTTCAGATGGTGCCATCTCGCTGCTGACTT
ATACAGGGGAAGGCCAGTGGGAAGTGAAGAAGATTAACAATGCTCACACGATTGGCTGTAATGCTGTCAGTTGGGCCCCA
GCTGTTGTGCCTGGAAGCCTTATAGACCAACCATCCGGACAGAAACCCAATTACATCAAGAAGTTTGCATCAGGTGGCTG
TGACAATCTCATCAAGTTGTGGAGGGAAGAGGAGGATGGCCAGTGGAAGGAGGAGCAAAAGCTAGAGGCACACAGTGACT
GGGTTCGAGACGTTGCCTGGGCCCCCTCCATTGGCTTGCCCACCAGCACCATTGCCAGCTGCTCTCAGGATGGGCGAGTG
TTTATTTGGACTTGTGATGACGCCTCAGGCAATATGTGGTCACCTAAACTCCTACACAAGTTCAATGATGTCGTGTGGCA
CGTGAGCTGGTCCATCACAGCAAATATCCTGGCTGTGTCAGGTGGAGACAATAAGGTGACCCTGTGGAAAGAGTCGGTGG
ATGGACAGTGGGTGTGCATCAGTGATGTCAACAAGGGCCAGGGTTCTGTGTCAGCCTCCATCACAGAGGGCCAACAGAAT
GAGCAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 32 .61 RPM |
| SRP017611_kidney | 52 .62 RPM |
| SRP017611_brain | 20 .56 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000005118 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000016439 | ortholog_one2many | 2 retrogenes | |
| Felis catus | ENSFCAG00000011245 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000157020 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000002401 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000030298 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000004482 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000017050 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013658 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000014619 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000004395 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1375 | 95.04 | 81.37 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1454 | 95.04 | 81.37 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000010628 retrocopies